Pairwise Alignments

Query, 656 a.a., outer membrane protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 695 a.a., outer membrane protein precursor MtrB (RefSeq) from Shewanella sp. ANA-3

 Score =  197 bits (500), Expect = 2e-54
 Identities = 176/701 (25%), Positives = 307/701 (43%), Gaps = 59/701 (8%)

Query: 2   KLSKTTIALAMAGFCFQAYALDTTFVNKEPQLVDIKNWTCKQCSEKT-MSGNMQVGVAHT 60
           KL+  T+AL +A   F   A      N     V +  W+CK C  +T +SG + VGV + 
Sbjct: 4   KLNLITLAL-LANTGFAVAADGYGLANANTDKVKLSAWSCKGCVVETGVSGTVGVGVGYN 62

Query: 61  DSDNKRTLNSLGTTAGLDALVDANVKMR-TGSQQLHAKAYMTDPNIAYGQVSIGEYGLYR 119
             ++ R+ N+ G+   +    DA++  R     +   +AY    +     V+ G+ G Y 
Sbjct: 63  GEEDIRSANAFGSKNEVAGKFDADLAYRGEKGYRASVEAYQLGMDGGRLDVNAGKQGQYN 122

Query: 120 ASVFGSTKFQQDANNAYSAQYIDQNGLITNKAYRDDLY---KQRDEFGFKVD----LEFN 172
            ++        D+N+A S      +G+  N     D +       +    +D    LE +
Sbjct: 123 INLNYRQIATYDSNSALS----PYSGIGGNNLTLPDNWVTAGSSSQMPLLMDSLNSLELS 178

Query: 173 LFDLNVFNGITYK-------YDNAYGNKALGLLQRQAPLKQKVQNIIKPYDTETNTLDAF 225
           L       G  Y+       Y N    +  GL Q       +   + +P D  T+T++A 
Sbjct: 179 LKRERAGLGFEYQGESLWSTYVNYMREEKTGLKQTSGSFFNQSMMLAEPVDYTTDTIEAG 238

Query: 226 VGLSGEQWQLKLDYSGSLFSNSIDAI---TDFN---GNQ---LYADAPDNESHQLAVSGF 276
           V L G++W   L Y+GS+F N  + +   + FN   G Q     A  PDN+SH +++ G 
Sbjct: 239 VKLKGDRWFTALSYNGSIFKNEYNQLNFDSAFNPTFGAQTSGAIALDPDNQSHTVSLMGQ 298

Query: 277 MQLDNTLFAMNVARGVQQQDDDLL-----YHSDSDYLAWNGKVELSNNHLSIDHRFNTQW 331
               +   +  +  G   QD  L+     Y   +D  A + KV+L   +L +  + +   
Sbjct: 299 YNDGSNSLSGRILTGQMSQDQSLVTSGYGYQLPTD--AVDAKVDLLGMNLKVVSKVSNSL 356

Query: 332 KVKGAFESSSREHSGARYQLGDYGQVT-----------RLLDKEINKYNLSTQYQFNREL 380
           ++ G+++   R+++     + ++ Q++              D    ++ ++  Y+    +
Sbjct: 357 RLSGSYDYYDRDNN---TPIEEWTQISINNVSGKVAYNTPYDNRTQRFKVAADYRITHGI 413

Query: 381 KSEVGFELKNTVRQDQEREEVDENQFWVKADYRFNPNLKLNAKLSYLQRDGSAYEANQLT 440
           K + G++ K   R+ Q+RE  DEN  W +          +  K SY  RDGS Y+A++ T
Sbjct: 414 KLDGGYDFKRDEREYQDRESTDENTVWARLRVNSFDMWDMWVKGSYGNRDGSQYQASEWT 473

Query: 441 SESSNAIIRKYYLADMEGGAFNFGANYT-YQFLDLGVKTQYKYNDYIHTRLGLTESTSIG 499
           S  +N+++RKY LAD +         +T  + L +    +Y  +DY  T +GLTES    
Sbjct: 474 SSETNSLLRKYNLADRDRTQIEARITHTPLESLTIDFGARYALDDYTDTVIGLTESKDTS 533

Query: 500 VDVYSNVTVNNQLRIYANAGVEQIDNNQS-SGFESDLNWLADTQDSFVYVGAGAIYQELF 558
            D   +  +   L   A    + I++ Q+ S   S   W    +D    VGAG  Y  L 
Sbjct: 534 YDANISYMITADLLATAFYNHQTIESEQAGSSNYSTPTWTGFIEDKVDVVGAGISYNNLL 593

Query: 559 DLPLSINMDYRYSESDSQSRIQPRAS---ADYFNFTHQFDISLNYELSKSDSLSLSYRYE 615
           +  L + +DY YS+SDS ++++   +    DYF   H  +    Y+ ++  +L   Y+ E
Sbjct: 594 ENKLRLGLDYTYSDSDSNTQVRQGITGDYGDYFAKVHNINFYAQYQATEKLALRFDYKIE 653

Query: 616 RYFDTDAAN-VDIDAILGLTTLGLMDNNFNAH--QVSFLYK 653
            Y D DAAN + +D I  +   G   +++ A    +S  YK
Sbjct: 654 NYKDNDAANDIAVDGIWNVVGFGSNSHDYTAQMLMLSMSYK 694