Pairwise Alignments

Query, 205 a.a., anaerobic dimethyl sulfoxide reductase, B subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 251 a.a., ferredoxin from Burkholderia phytofirmans PsJN

 Score =  114 bits (284), Expect = 2e-30
 Identities = 63/174 (36%), Positives = 84/174 (48%), Gaps = 30/174 (17%)

Query: 5   TQYGFYVDTTKCSGCKTCQVACKDRSDIEVGKQWRRTYEYCG----GNWTADGQGAYHQD 60
           TQ    +D   C GC  C  +CK+         W  + E         + AD  G +   
Sbjct: 2   TQMALVIDLNVCVGCHACVTSCKE---------WNTSGESGSLADLNPYDADPSGTFFNR 52

Query: 61  VFAY-----------YISISCNHCSNPVCVKACPTGAMYKERSTGLVKVNQDLCIGCESC 109
           V ++           +   SC HC +P CV  CPTGA YK +  GLV V+ D CIGC+ C
Sbjct: 53  VQSFEAGSFPNAETIHFPKSCLHCEDPPCVPVCPTGASYKRKEDGLVLVDFDRCIGCKYC 112

Query: 110 ARACPYDAPQIDPQRKVMTKCDGCSDRV------AKGLKPSCVMSCPQRALDFG 157
           A ACPY A ++D  RK MTKC  C DR+       +  +P+CV++CP  A  FG
Sbjct: 113 AWACPYGARELDESRKEMTKCTLCVDRIHDENLSERDRQPACVLACPTSARLFG 166