Pairwise Alignments

Query, 290 a.a., transcriptional regulator ilvY (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 296 a.a., Cys regulon transcriptional activator CysB from Pseudomonas fluorescens FW300-N1B4

 Score = 92.4 bits (228), Expect = 1e-23
 Identities = 73/289 (25%), Positives = 129/289 (44%), Gaps = 9/289 (3%)

Query: 1   MDIRSLKLYLHLCDSLHFAKTAEQMHVSPSTLSRALQRLEEEVNAKLFERDNRSVTLTHA 60
           MD+ +L  ++ + ++  F+   E++H++   +S+ +  LE+++  +LF+R  R V+LT A
Sbjct: 1   MDLANLNAFIAIAETGSFSGAGERLHLTQPAISKRIAGLEQQLKVRLFDRLGREVSLTEA 60

Query: 61  GREFKLFAEQTLHHWRNLRHSIDLKQDVLRGTLNLYCSVTAAYSHLPQLLERFRQEHPFV 120
           GR     A Q L+   + R ++      + G L L  S       LP LL  F + +P V
Sbjct: 61  GRALLPRAYQILNVLDDTRRALTNLTGEVSGRLTLATSHHIGLHRLPPLLREFTRRYPQV 120

Query: 121 EIALTTGDAANALAEIQQNRADIAIAALPDPFPATLHFAKIDDVPLS-LIAPTMRCAVQQ 179
            + +   D+  A  EI   RA++A+  L     A +    + D PL  ++AP        
Sbjct: 121 ALDIQFLDSEVAYEEILHGRAELAVITLAPEPHALVKATPVWDDPLDFVVAPEHSLIANG 180

Query: 180 QISQTQIDWARVPFIIPDHGPGRRR-ADNWFKQMGISPNIYAQVSGQEAIASMVALGCGV 238
            +S   I  A  P + P             F+  G++PNI    +  E I  MV++G   
Sbjct: 181 PVSLADI--ALHPAVFPGGNTFTHHIVQRLFEAQGLTPNIAMSTNYLETIKMMVSIGLAW 238

Query: 239 SISPEVVINNSPVRDRIQLLPSPVSIAPFELGCCCKVKRLGDPIVNAFL 287
           S+ P  +++     D++  +P P      +LG     +R       AF+
Sbjct: 239 SVLPRTMLD-----DQVARIPLPGIQLTRQLGYILHTERTLSNAARAFM 282