Pairwise Alignments

Query, 290 a.a., transcriptional regulator ilvY (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 306 a.a., transcriptional regulator, LysR family from Pseudomonas syringae pv. syringae B728a

 Score = 93.6 bits (231), Expect = 5e-24
 Identities = 75/286 (26%), Positives = 127/286 (44%), Gaps = 9/286 (3%)

Query: 1   MDIRSLKLYLHLCDSLHFAKTAEQMHVSPSTLSRALQRLEEEVNAKLFERDNRSVTLTHA 60
           +D++ ++ Y+ + ++L+F K A+++++S   LS A++RLEE +  +L +R  RS  LT A
Sbjct: 2   IDLKLMRQYVVVAETLNFRKAAQRLNMSQPPLSVAIRRLEECLGVQLLQRSTRSTQLTAA 61

Query: 61  GREFKLFAEQTLHHWRNLRHSIDLKQDVLRGTLNLYCSVTAAYSHLPQLLERFRQEHPFV 120
           G  F   A QTL                + GT+ L    +     LP LL R++  +P V
Sbjct: 62  GVVFLAEARQTLLQAERACEMARRSAAGMLGTIRLGFVDSVVDGLLPALLRRYQAANPNV 121

Query: 121 EIALTTGDAANALAEIQQNRADIAIAALPDPFPATLHFAKI-DDVPLSLIAPTMRCAVQQ 179
           +I L        L  ++  R D+ I  LP   P T+H   + +D  ++++      A Q 
Sbjct: 122 DIQLQEATPPEQLEGLRNERLDVGILVLPVIDPGTIHIEPLFEDRMVAVLPQDHPLAEQT 181

Query: 180 QISQTQIDWARVPFIIPDHGPG-RRRADNWFKQMGISPNIYAQVSGQEAIASMVALGCGV 238
            I    +         P HGPG            G +P +  Q    +  A++VA G GV
Sbjct: 182 SIGLAALADQSWILFAPHHGPGMHSHILLACASAGFTPRVVQQPRQMQTTAALVAGGMGV 241

Query: 239 SISPEVVINNSPVRDRIQLLPSP-------VSIAPFELGCCCKVKR 277
           ++ P+      P R   + +  P       +++A  EL  C +  R
Sbjct: 242 ALMPQRYARRQPGRLACREITGPGTPVAYVLALAYRELSPCAQSLR 287