Pairwise Alignments

Query, 290 a.a., transcriptional regulator ilvY (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 309 a.a., LysR family transcriptional regulator from Ralstonia sp. UNC404CL21Col

 Score = 89.7 bits (221), Expect = 7e-23
 Identities = 85/299 (28%), Positives = 138/299 (46%), Gaps = 21/299 (7%)

Query: 1   MDIRSLKLYLHLCDSLHFAKTAEQMHVSPSTLSRALQRLEEEVNAKLFERDNRSVTLTHA 60
           MDIR L+ +  L D LHF + A ++ +S   LS+ ++ LE+E+   LF R +  V LT A
Sbjct: 1   MDIRLLRYFSVLADELHFGRAAARLFMSQPPLSQQIRLLEDEIGTPLFVRSHHRVELTAA 60

Query: 61  GREFKLFAEQTLHHWRNLRHSIDLKQDVLR---GTLNLYCSVTAAYSHLPQLLERFRQEH 117
           GR  K   EQ    +  L  ++DL +   R   G L +    +     LP+ L +FR+ +
Sbjct: 61  GRTLK---EQAPLVFAQLNRALDLTRQAGRGQVGELEIGMISSVMVGLLPEALRQFRERY 117

Query: 118 PFVEIALTTGDAANALAEIQQNRADIAIAALPDPFPATLHFAKIDDVPLSLIAP-TMRCA 176
           P VE  L     A  +A +++ R D  I  L    PA +    +   P+ +  P T R A
Sbjct: 118 PGVEWRLQEMTPAAQVAALKERRIDACIFRLGHEDPA-VRSELLQHEPIVMALPATHRLA 176

Query: 177 VQQQISQTQIDWARVPFIIPDHGPGRRRADNWFK---QMGISPNIYAQVSGQEAIASMVA 233
               ++    D+A  PF+  +     R AD+      Q G +P +  QV+  + + ++V 
Sbjct: 177 GHASLALG--DFAGEPFVAFE-SKRSRFADHLLHLCIQAGFAPLVRQQVTEVQTLLALVN 233

Query: 234 LGCGVSISPEVVINNSPVRDRIQLLPSPVSIAPFELGCCCKVKRLGD--PIVNAFLEAI 290
            G GV++ P    N +P     + L   +   P  +       R+ D  P++ AFLE +
Sbjct: 234 AGFGVALLPGSTANLAPPGVVFRPLEPALPAVPLYVH-----YRVDDHSPVLKAFLETL 287