Pairwise Alignments

Query, 492 a.a., ketol-acid reductoisomerase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 350 a.a., ketol-acid reductoisomerase from Bifidobacterium breve UCC2003

 Score =  144 bits (363), Expect = 5e-39
 Identities = 96/286 (33%), Positives = 148/286 (51%), Gaps = 15/286 (5%)

Query: 40  IVILGCGAQGLNQGLNMRDSGLNIAYALRPEAIAQKRASWQKATDNGFKVGTFEELIPSA 99
           + ILG G+QG    LN+RDSG+++   LRP +      S + A + G +V    E +  A
Sbjct: 21  VAILGYGSQGHAHALNLRDSGVDVVVGLRPSS-----KSVEFAKEQGLEVKPVGEAVAEA 75

Query: 100 DLVLNLTPDKQHSNVVSA-VMPLMKQGATLSYSHGFNIVEEGMQIRPDITVIMVAPKCPG 158
           D+V+ L PD+  + V    V P +K GA L+++HGFNI    ++   D  V MVAPK PG
Sbjct: 76  DVVMILLPDQYQAKVYEEEVEPNLKPGAALAFAHGFNIHYGYIKPSEDHPVFMVAPKGPG 135

Query: 159 TEVREEYKRGFGVPTLIAVHPENDPNGDGLDIAKAYASATGGDRAGVLQSSFIAEVKSDL 218
             VR EY  G GVP ++AV  E DP+G    +  AYA A G  RAG ++++F  E ++DL
Sbjct: 136 HIVRREYAAGRGVPVVVAV--EQDPDGKTWPLCLAYAKALGALRAGAIKTTFTEETETDL 193

Query: 219 MGEQTILCGMLQTGAILGYEKMVADGVEPGYAAKLIQQGWETVTEALKHGGITNMMDRLS 278
            GEQ +L G +     LG++ +   G +P  A   +    + + +    GG+       S
Sbjct: 194 FGEQDVLMGGINHLCDLGFDVLTEAGYQPEIAYFEVFHELKMLVDLANEGGLNKARWSCS 253

Query: 279 NPAKIKAFE---IAEDLKDILQPLFEKHMDDIISGEFSRTMMQDWA 321
           + A+   +    I ++ K  +Q   ++  D    G F++  M D A
Sbjct: 254 DTAQYGDYTSTVITDETKKRMQYQLKRIQD----GSFAKEFMDDQA 295



 Score = 38.9 bits (89), Expect = 3e-07
 Identities = 23/72 (31%), Positives = 33/72 (45%)

Query: 351 EQTYFDKGIFLVAMIKAGVELAFDTMVSAGIVEESAYYESLHETPLIANTIARKRLYEMN 410
           E   F +   L+  I    +L FD +  AG   E AY+E  HE  ++ +      L +  
Sbjct: 190 ETDLFGEQDVLMGGINHLCDLGFDVLTEAGYQPEIAYFEVFHELKMLVDLANEGGLNKAR 249

Query: 411 VVISDTAEYGCY 422
              SDTA+YG Y
Sbjct: 250 WSCSDTAQYGDY 261