Pairwise Alignments

Query, 378 a.a., aminotransferase, class V (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 400 a.a., Serine--glyoxylate transaminase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  151 bits (381), Expect = 3e-41
 Identities = 116/363 (31%), Positives = 179/363 (49%), Gaps = 25/363 (6%)

Query: 21  PGPSDVYPEVLAAQARPT----VGHLDPLFVSMMDELKSLIQYAFQTKNEMTMAVSAPGS 76
           PGP++V   V  A   P           L + + + +KS+++    T+    M     G+
Sbjct: 11  PGPTNVPEAVRQAMNVPMQDMRAADFGDLTLGLFEGMKSVLR----TERGTVMLFPGSGT 66

Query: 77  AGMETCFVNLVEPGEKVIVCRNGVFGERMRQNVERVGAIAVLVDNEWGT--PVDPVAVEA 134
              E    N + PG+KV++ R+G F     Q  ER+G    L+D  WG   PV  +A   
Sbjct: 67  GAWEAAITNTLNPGDKVLMARHGHFSTLWAQMAERLGLQVELIDIPWGAGAPVKEIARRL 126

Query: 135 ALKAHPDAKFLAFVHAETSTGALSD-AKTLCALAKQY-GCLSIVDAVTSLGGVELRVDEW 192
              AH + K +   H ET+TG  SD A    AL + +   L  VD V+S+G ++ R+DEW
Sbjct: 127 GRDAHDEIKAVFVTHNETATGVASDIAAVRRALDENFHDALLFVDGVSSVGSLDFRMDEW 186

Query: 193 GIDAIYSGSQKCLSCVPGLSPVSFSPAAVEKLKNRKTPVQSWFLDQSLVMAYWTSAGGKR 252
            +D + +GSQK L   PGL  +  S  A+E    R   ++  + + S ++A   +A G  
Sbjct: 187 EVDLVVTGSQKGLMLPPGLGILGVSEKALEAA--RSATMRRAYFEFSDMLA--MNADG-- 240

Query: 253 SYHHTAPVNALYAMHESLRILAAEGLENAWKRHQDMHLVLRAGLEKLGLKFVVAEASRL- 311
            + +T P   L+ +  SL  +A EGL+N   RH  +   +R G+   GL  +VAE   L 
Sbjct: 241 YFPYTPPTPLLHGLRASLARIATEGLDNVIARHTRLAEGVRRGIAAWGLP-LVAEHHTLY 299

Query: 312 -PQLNAIYIPEGVDDAAVRARLLKDYNLEIGAGLGALAGKAWRIGLMGFGARRENVALCL 370
              ++AI +P+ +D   V     +++N   G+GLG L GK +RIG +G      N A+CL
Sbjct: 300 SDTVSAIRVPQEIDAREVLRIAYEEFNTSFGSGLGPLDGKVFRIGHLG----DLNEAMCL 355

Query: 371 RAL 373
            AL
Sbjct: 356 TAL 358