Pairwise Alignments

Query, 639 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 534 a.a., diguanylate cyclase/phosphodiesterase from Pseudomonas syringae pv. syringae B728a

 Score = 97.4 bits (241), Expect = 1e-24
 Identities = 106/431 (24%), Positives = 188/431 (43%), Gaps = 23/431 (5%)

Query: 219 LKHLFQSLDEEVGSLRKKNLT-------DPASGLPNRQYVVSRLNGWLSEPSSG-ALFLA 270
           LK L Q L      L +           DP SGL NR+    +L   L +P++  A+FL 
Sbjct: 79  LKRLMQQLHSSYNDLLESQALSESLARHDPLSGLLNRRVFHEQLVARLQQPATQTAVFLI 138

Query: 271 KLDWLEEVHSKYGYQVRDETIRLLAEKLVQQLNEITPSVIARIAAFEFAFLVT-DVEHDQ 329
            LD  + ++  +G+   D  I  +AE L         SV AR+   EF   V+ D  H +
Sbjct: 139 DLDKFKLINDTHGHAAGDAAICAVAESLRDATVGWQASV-ARLGGDEFGLAVSGDFSHAE 197

Query: 330 ISKYLQTLIRTINQEISKAGCKPNENFAIGVAERVGQMKVSD---ILAQADNALQKALKD 386
           ++   + ++  I    S  G  P    +  +   +  M  SD   +L +AD+A+ +    
Sbjct: 198 LAPLAENILAKI--AASSVGL-PRVALSATLGIAIAPMDGSDPDLLLQRADSAMYRGKAG 254

Query: 387 NKT-FHWFETT-EQQIFTREQWRDNLSHAISNKKFKFRWQPIQFCNGDGVTQRELYCQ-L 443
            +  FH++E + E++   +EQ+   L+ AI  K  +  +QPI       +   EL  + L
Sbjct: 255 GRARFHFYEVSFEREQRLQEQFARELTLAIEEKDIQPFYQPIVSLPEQRLAGFELLARWL 314

Query: 444 ELGDKLTHAGQFMPYIELLSLGSLLDKCLIETVYEQKLLERNYEPLAINLTHQSLSDSQF 503
                +     F+P  E L L   L   L+   ++Q     +   LAIN+T   +    F
Sbjct: 315 HPERGIILPLDFIPVAEQLGLIKPLTATLLLQAFDQARDWPSDFTLAINVTSLMIESPDF 374

Query: 504 HQWLNHFLRNAP-QVERMCFEIPEAGVYSDLESCTRLCNIIRDNGAKFGIDHFGRQFGSM 562
             WL          + R+  E+ E  + ++++S       +R  G    +D FG  +  +
Sbjct: 375 PDWLEQLANEGKFPLSRLEVEVTENALVANVDSARLNLERLRAMGVSVALDDFGTGYSGL 434

Query: 563 SYLQGLRPSYVKLDQSFAYYDEASHN-SELCRAIINVAKGLDIQVIVTGIQEKAQLERFN 621
            +L  L    +K+D+SF  +D A  N +E+ +AI+ + K L +++   G++ +   +   
Sbjct: 435 YHLTRLAIDKIKIDRSF--FDTALENQNEMVKAILALGKSLRMKITAEGVEHERLADWLA 492

Query: 622 ELKTDAYQGFI 632
             + D  QG++
Sbjct: 493 THECDFAQGYL 503