Pairwise Alignments

Query, 639 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 861 a.a., EAL domain-containing protein from Rhodopseudomonas palustris CGA009

 Score =  102 bits (255), Expect = 5e-26
 Identities = 99/406 (24%), Positives = 179/406 (44%), Gaps = 15/406 (3%)

Query: 240 DPASGLPNRQYVVSRLNGWLSEPSSG---ALFLAKLDWLEEVHSKYGYQVRDETIRLLAE 296
           D  +GLPNR      L   L+    G   AL    +D  + V+   G+ V D+ ++ LA+
Sbjct: 432 DDLTGLPNRSSFRKHLGEALNLIEPGDQLALLYIDIDEFKIVNDTLGHPVGDQLLQALAD 491

Query: 297 KLVQQLNEITPS-VIARIAAFEFAFLVTDVEHDQISKYLQTLIRTINQEISKAGCKPNEN 355
           +L    N + P   +AR+   EFA ++ D     I +++  L  T+   I  AG   + +
Sbjct: 492 RL---RNCVGPDDYVARLGGDEFAVVMADAS--DIREFVAKLQATLRDSIDCAGQVLSPD 546

Query: 356 FAIGVAERVGQM-KVSDILAQADNALQKALKDNKTFHWFETTEQQIFT--REQWRDNLSH 412
            +IG+A       +V D++A+AD AL  A  + +  + +   E  +    R +    L  
Sbjct: 547 ASIGIALAPDHSCEVDDLIAKADLALYAAKAEGRRTYRYFMPEMDVKAKARHELATELKR 606

Query: 413 AISNKKFKFRWQPIQFCNGDGVTQRELYCQLELGDK-LTHAGQFMPYIELLSLGSLLDKC 471
           A++   F+  +QP+   N   +   E   + +   +      +F+P  E + L   L + 
Sbjct: 607 AVTEHDFRLHFQPLVDLNSGTIAGCEALLRWQHPVRGFVSPAEFIPLAEDIGLIEDLGEW 666

Query: 472 LIETVYEQKLLERNYEPLAINLTHQSLSDSQFHQWLNHFL-RNAPQVERMCFEIPEAGVY 530
           +++      +       +A+N++      + F   +   L R      R+  EI EA + 
Sbjct: 667 VLDQACRVAVGWPASMTVAVNVSPIQFRRATFPLKVAAALARTGLAAHRLELEITEALLL 726

Query: 531 SDLESCTRLCNIIRDNGAKFGIDHFGRQFGSMSYLQGLRPSYVKLDQSFA-YYDEASHNS 589
            D ES   + N +RD G K  +D FG  + S+SYL       +K+D+SF     E + ++
Sbjct: 727 QDNESTLAILNQLRDLGVKIALDDFGTGYSSLSYLHRFPIDKIKIDKSFVDTLTEEAGSA 786

Query: 590 ELCRAIINVAKGLDIQVIVTGIQEKAQLERFNELKTDAYQGFIAPP 635
            + RAI+ +A   +   +  G++  AQ +    L     QG++  P
Sbjct: 787 TIVRAIVQIAAAGNKTTLAEGVETAAQRDLLRHLGCQQMQGYLFSP 832