Pairwise Alignments

Query, 639 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 695 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Ralstonia sp. UNC404CL21Col

 Score =  111 bits (278), Expect = 9e-29
 Identities = 108/433 (24%), Positives = 185/433 (42%), Gaps = 28/433 (6%)

Query: 221 HLFQSLDEEVGSLRKKNLTDPASGLPNRQYVVSRLNGW-LSEPSSG---ALFLAKLDWLE 276
           HL  SL        +    D  +GLPNR ++   L    LS    G   ALF   LD   
Sbjct: 251 HLEASLARVANQTPRPQFHDTLTGLPNRLHLREALEAAILSSTRRGRPFALFYLDLDNFG 310

Query: 277 EVHSKYGYQVRDETIRLLAEKLVQQLNEITPSVIARIAAFEFAFLVTDVEHDQISKYL-Q 335
           +++ +YG    D  ++++AE+L Q +       +AR+   EF  LV  +   + +  +  
Sbjct: 311 QINDQYGRNAGDRVLQIIAERLRQTIRG--EDTVARLGGDEFGILVEGLALPEAAATIGD 368

Query: 336 TLIRTINQEISKAGCKPNENFAIGVAERVGQMKVSD-ILAQADNALQKALKDN-KTFHWF 393
            L+  + + +   G +     +IGV         +D +L  AD A+    +     + +F
Sbjct: 369 KLLFRLRESVEVEGRRLRATASIGVVVHPHNGATADALLEHADTAMFDCKQSTGNAYRFF 428

Query: 394 E----TTEQQIFTREQWRDNLSHAISNKKFKFRWQPIQFCNGDGVTQRELYCQL---ELG 446
           E    TT  ++    Q +  LSHA  N +    +QP        +T  E   +    ELG
Sbjct: 429 EPRLNTTAHRVL---QIQRALSHAALNGQLSVYYQPKYDARTQAMTGAEALLRWNHPELG 485

Query: 447 DKLTHAGQFMPYIE----LLSLGSLLDKCLIETVYEQKLLERNYEPLAINLTHQSLSDSQ 502
                  +F+P  E    ++ LG  + + +   +     +    + +A+NL+ +      
Sbjct: 486 P--VSPAEFIPLAERTGTIVELGDWVVEEVCRQIMHWDAIGMPPQRIAVNLSPRQFQQPD 543

Query: 503 FHQWLNHFL-RNAPQVERMCFEIPEAGVYSDLESCTRLCNIIRDNGAKFGIDHFGRQFGS 561
             Q L+  L R      R+ FEI E     D          I+  G +  ID FG  + S
Sbjct: 544 LVQRLSQILHRYQVAAHRLMFEITETAAMRDAGQSIAAIRQIQSLGFEVAIDDFGTGYSS 603

Query: 562 MSYLQGLRPSYVKLDQSF--AYYDEASHNSELCRAIINVAKGLDIQVIVTGIQEKAQLER 619
           +SYLQ  R   +K+D++F  A  D  +  + + RAI  +A  LD+ V+  G++ +AQ++ 
Sbjct: 604 LSYLQRFRAQQIKIDRAFVSALDDNPAEAAAIIRAICAMAHSLDMTVVAEGVETEAQMQA 663

Query: 620 FNELKTDAYQGFI 632
              L+ D  QG++
Sbjct: 664 LVSLQCDQVQGYL 676