Pairwise Alignments

Query, 639 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 604 a.a., diguanylate cyclase (GGDEF) domain-containing protein from Paraburkholderia bryophila 376MFSha3.1

 Score = 95.9 bits (237), Expect = 5e-24
 Identities = 99/391 (25%), Positives = 171/391 (43%), Gaps = 29/391 (7%)

Query: 266 ALFLAKLDWLEEVHSKYGYQVRDETIRLLAEKLVQQLNEITPS-VIARIAAFEFAFLVTD 324
           AL L  +D  + V+   GY   DE +R  A +L   +N  +PS  +AR+A+ EFA LV  
Sbjct: 195 ALLLLDIDDYQRVNRALGYDAGDEMLRDTARRL---MNMTSPSETVARVASDEFAILVKP 251

Query: 325 VEH-DQISKYLQTLIR----TINQEISKAGCKPNENFAIGVAERVGQMKVSD-------I 372
             +    +   +TL R     I Q    +G + + + +IG+A        +D       +
Sbjct: 252 AANRTDAAAAAETLARRLLTAIQQPYVFSGQQVHLSASIGIALYPDVRHANDTAAHDTHL 311

Query: 373 LAQADNAL--QKALKDNKTFHWFETTEQQIFTREQWRDNLSHAISNKKFKFRWQPIQFCN 430
           L  AD+AL   KA   N    +          R +   +L   + N +F   +QPI    
Sbjct: 312 LRWADHALLQAKAAGGNTLAFYVPDDNPADAERLKLEADLYDGVRNGEFSLHFQPITSSR 371

Query: 431 GDGVTQRELYCQ-LELGDKLTHAGQFMPYIELLSLGSLLDK------CLIETVYEQKLLE 483
             GV   E   + L     L     F+P  E + L + L        C+    ++ K + 
Sbjct: 372 THGVVGVEALIRWLHPVHGLVPPSMFIPLAESIGLINFLGNWVLKIACMQLIQWDAKGIS 431

Query: 484 RNYEPLAINLTHQSLSDSQFHQWLNHFLR-NAPQVERMCFEIPEAGVYSDLESCTRLCNI 542
             Y  +A+N++ Q   D +F   +   +        R+ FEI E+ +  D      L   
Sbjct: 432 LQY--VAVNVSPQQFRDPRFKDAVREAINLTGIDPRRLVFEITESLLMHDPAHAKVLLED 489

Query: 543 IRDNGAKFGIDHFGRQFGSMSYLQGLRPSYVKLDQSFAYYDEASHNSE-LCRAIINVAKG 601
           +   G +F +D FG  + S++YLQ    + +K+D+SF      S N + +  A++ +A+ 
Sbjct: 490 LTAMGIRFAVDDFGTGYSSLAYLQRFPLAKLKIDRSFVENLLTSRNDQAIVSAVVGLAQT 549

Query: 602 LDIQVIVTGIQEKAQLERFNELKTDAYQGFI 632
           LD++++  G++ +AQ     E+  D  QG++
Sbjct: 550 LDLELVAEGVETEAQRALLTEMGCDHIQGWL 580