Pairwise Alignments

Query, 235 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 206 a.a., transglutaminase-like cysteine peptidase from Rhodopseudomonas palustris CGA009

 Score = 48.5 bits (114), Expect = 1e-10
 Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 13/162 (8%)

Query: 52  ERAGMRARAWFKVLAEASTVDEKEKLLKVNNFFN-LFRFVDDIKLWGESNYWATPMEFIG 110
           E  G R++A   VL + +  D    LLKVN + N   + + D+  WG    W+ P +   
Sbjct: 54  ECRGSRSQARDIVLTQTAWQD----LLKVNRWVNDTIKPLTDMDHWGVIEKWSLPSD--- 106

Query: 111 VNGGDCEDFSIAKYFTLLELGVPEDKMRITMVKATSVNQYHMVLAYYDTPASIPLVLDNL 170
              GDCED+ + K   L++ G P + + IT+V+    N+ H VL           +LDN 
Sbjct: 107 -GYGDCEDYVLLKRKMLIDAGWPREALLITVVR-DKKNEGHAVLTVKTDKGE--FILDNQ 162

Query: 171 DHVIKPATQR-KDLIPVYSFNGKQLWLNKEQGRGVLAGSSTR 211
           +  +   T+     +   S +    W+    GR  +A +S +
Sbjct: 163 NEEVVAWTETGYRFVKRQSQSDPNAWVALGDGRPAIATASAK 204