Pairwise Alignments

Query, 235 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 235 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  380 bits (976), Expect = e-110
 Identities = 183/235 (77%), Positives = 203/235 (86%)

Query: 1   MNGRLKGNNAFFRACRSCLVVSALGISCLYAAPTQKLDEAKITSTLEKRYGERAGMRARA 60
           M  ++     F R C+ C+V +ALG SCLYA+PTQ LD   I STLE RYGERAGMR  A
Sbjct: 1   MKAKIGRQKRFQRVCQLCVVATALGFSCLYASPTQTLDANYIKSTLEARYGERAGMRVAA 60

Query: 61  WFKVLAEASTVDEKEKLLKVNNFFNLFRFVDDIKLWGESNYWATPMEFIGVNGGDCEDFS 120
           WFKVL E+  + E+EK+ KVNNFFNLFRFVDDIKLWG SNYWATPMEFIGVNGGDCEDFS
Sbjct: 61  WFKVLDESQGLSEQEKITKVNNFFNLFRFVDDIKLWGVSNYWATPMEFIGVNGGDCEDFS 120

Query: 121 IAKYFTLLELGVPEDKMRITMVKATSVNQYHMVLAYYDTPASIPLVLDNLDHVIKPATQR 180
           IAKYFTLL+LGVP+DK+RITMVKATSVNQYHMVLAYYDTP SIPLVLDNLD  IKPATQR
Sbjct: 121 IAKYFTLLQLGVPDDKLRITMVKATSVNQYHMVLAYYDTPGSIPLVLDNLDRQIKPATQR 180

Query: 181 KDLIPVYSFNGKQLWLNKEQGRGVLAGSSTRLEKWNDLTHRLGVDRLRQPKLKLE 235
           +DLIPVYSFNG+QLWLNKE+GRGVLAGSS RLEKWNDL +RLGV+RL+ PKL+LE
Sbjct: 181 QDLIPVYSFNGRQLWLNKEKGRGVLAGSSERLEKWNDLKNRLGVERLKMPKLRLE 235