Pairwise Alignments

Query, 201 a.a., OmpA family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 344 a.a., Thrombospondin type 3 repeat:OmpA/MotB:OmpF from Pseudomonas syringae pv. syringae B728a

 Score =  112 bits (280), Expect = 8e-30
 Identities = 56/146 (38%), Positives = 84/146 (57%), Gaps = 1/146 (0%)

Query: 36  SDKDGDGVIEARERCNETAKGAGTDNYGCGQIKSINERKEINVLFPNNSAYIAPEYYPQI 95
           SD D DGV +  ++C +T      D  GC  +  +  R E++V F  + + + P  Y  I
Sbjct: 195 SDSDNDGVCDNVDKCPDTPANVTVDADGCPAVAEV-VRVELDVKFDFDKSVVKPSSYGDI 253

Query: 96  EEVAIFLRQYPTTKVTIEGHTSRTGTDETNKELSQERANAVTAVLAERFGIDRSRLTAIG 155
           + +A F++QYP T  T+EGHT   G D  N++LS+ RANAV  VL  ++G+  SR+ ++G
Sbjct: 254 KNLADFMQQYPQTTTTVEGHTDSVGPDAYNQKLSERRANAVKQVLVNQYGVGASRVNSVG 313

Query: 156 YGSSRPIVLEQTPEAEIRNRRVVAEV 181
           YG ++P+    T      NRRV AEV
Sbjct: 314 YGETKPVADNATEAGRAVNRRVEAEV 339