Pairwise Alignments

Query, 201 a.a., OmpA family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 447 a.a., flagellar motor protein MotB from Pedobacter sp. GW460-11-11-14-LB5

 Score = 77.4 bits (189), Expect = 4e-19
 Identities = 50/148 (33%), Positives = 75/148 (50%), Gaps = 9/148 (6%)

Query: 37  DKDGDGVIEARERCNETAKGAGTDNYGCGQIK-------SINERKEINVLFPNNSAYIAP 89
           D DGDGV +  ++C  T  G   D  GC   K       + N      + F  NS+ +  
Sbjct: 297 DTDGDGVADQFDKCPGTPAGTAVDGSGCPLPKPAPVDSVASNVTGFEKIGFDFNSSVLKT 356

Query: 90  EYYPQIEEVAIFLRQYPTTKVTIEGHTSRTGTDETNKELSQERANAVTAVLAERFGIDRS 149
           E YP +++++  LR+    KVT+ G+ S  GT   N +LS++RAN+V   L    G++ S
Sbjct: 357 ESYPTLDKLSSVLRENGG-KVTVNGYASSEGTAAYNLKLSKDRANSVKTYLVNS-GVNAS 414

Query: 150 RLTAIGYGSSRPIVLEQTPEAEIRNRRV 177
           ++   G G + PI    T E  I+NRRV
Sbjct: 415 QVATKGNGEANPIASNDTEEGRIQNRRV 442