Pairwise Alignments

Query, 201 a.a., OmpA family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 440 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score = 77.8 bits (190), Expect = 3e-19
 Identities = 53/158 (33%), Positives = 74/158 (46%), Gaps = 17/158 (10%)

Query: 35  LSDKDGDGVIEARERCNETAKGAGTDNYGC----------GQIKSINERKEINVLFPN-- 82
           L D DGDGV +  ++C +T  G   D  GC            I +  +RK +N    N  
Sbjct: 280 LKDTDGDGVADKLDKCPDTPAGTVVDGAGCPLKTPEKVVEKVIVTEEDRKVVNEAIKNLE 339

Query: 83  ---NSAYIAPEYYPQIEEVAIFLRQYPTTKVTIEGHTSRTGTDETNKELSQERANAVTAV 139
                A I  + Y  +  VA  L Q     + + GHT  TG+ E N  LS++RA +V A 
Sbjct: 340 FDLGKATIRSKSYASLNRVAALLIQ-KNFSLKLAGHTDNTGSKELNLRLSKDRAESVKAY 398

Query: 140 LAERFGIDRSRLTAIGYGSSRPIVLEQTPEAEIRNRRV 177
           L  + G + SR+ A GYG  +PI   +T     +NRRV
Sbjct: 399 LVSQ-GANASRIEATGYGMGQPIATNKTAAGRQQNRRV 435