Pairwise Alignments

Query, 201 a.a., OmpA family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 441 a.a., flagellar motor protein MotB from Pedobacter sp. GW460-11-11-14-LB5

 Score = 75.5 bits (184), Expect = 1e-18
 Identities = 55/162 (33%), Positives = 75/162 (46%), Gaps = 18/162 (11%)

Query: 32  ASDLSDKDGDGVIEARERCNETAKGAGTDNYGCG---QIKSINERKEI------------ 76
           A DL D D DGV    ++C  TA G   D  GC    Q + I E K I            
Sbjct: 277 AKDLGDDDNDGVANKFDKCPGTASGTVVDGSGCPIKVQREIIKETKVITEADRKVVRDAI 336

Query: 77  -NVLFPNNSAYIAPEYYPQIEEVAIFLRQYPTTKVTIEGHTSRTGTDETNKELSQERANA 135
            N+ F    + I  + Y  +  VA  L +     + + GHT  TG+ E N  LS++RA +
Sbjct: 337 SNLEFDLGKSTIRSKSYATLNRVAGLLVE-KNFSLKLAGHTDNTGSRELNLRLSKDRAES 395

Query: 136 VTAVLAERFGIDRSRLTAIGYGSSRPIVLEQTPEAEIRNRRV 177
           V A L  + G + SR+ A GYG  +PI   +T     +NRRV
Sbjct: 396 VKAYLVSQ-GANASRIEATGYGPDQPIATNKTAAGRQQNRRV 436