Pairwise Alignments

Query, 471 a.a., agglutination protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 456 a.a., outer membrane secretion protein from Sinorhizobium meliloti 1021

 Score =  149 bits (375), Expect = 2e-40
 Identities = 112/454 (24%), Positives = 210/454 (46%), Gaps = 27/454 (5%)

Query: 15  AVLLSAILLPLSAQSQTLEQAVAHTLDTNPDLRVAFNRFKAREEQVNQAIAGYMPTVDLT 74
           AV  S +L P +  ++T+  A+A     NPDL  A    +A +E V  A AGY P +   
Sbjct: 13  AVSTSVLLAPHAVLAETIFGAMAKAYANNPDLNAARAGLRATDEGVPIAKAGYRPQI--- 69

Query: 75  GGYGYEQTDSVSTRRRKNVGDVDSNGVAELNRGEFGISLKQMLFDGFYTSSEVDRYSFEA 134
                    S S     +  D +  G  + + G+ GIS+ Q +FDGF T + V     + 
Sbjct: 70  ---------SASATGTLSRVDAERTGTRDFHSGQVGISITQTIFDGFQTLNNVRAAQADV 120

Query: 135 SADQWALLAAAEDMALDVSKAYLNYLRTDEVLKLAEKNLNSHKEIYDQIKQRTDSGLGST 194
            + +  L A    + L  +++Y N  R  +V+ +  +NL   +E     + R + G G+ 
Sbjct: 121 FSSRETLKANEIQILLSAAQSYANIARDQQVVSIRRQNLAFLREQLSAAQARLEVGEGTR 180

Query: 195 ADLSQISGRLARANANVISARNNLLDAKAQFVRVVAADPVDLIQPVPDADMLPKDLNSSI 254
            D+SQ    LA A + +++A   L  ++A +V++V A P  + QP P    +P+ L+ ++
Sbjct: 181 TDVSQAEAELANAQSLLVAAIAQLKQSEAVYVQIVGAAPTGIRQPGPATKAMPRSLDQAV 240

Query: 255 ADAEKNHPILKSAANDIRAAENERSSTQANYYPQVSLELNGSWNNDVGGEDGVSAIASQN 314
           A   + +P + +A   + +A  +  S +    P V L+  G+ + + G           N
Sbjct: 241 ATGLRENPQILAAQYAVDSAGYQVKSAEGTMLPGVVLQ--GAVSRNTG-----------N 287

Query: 315 VGGYSNDIVAMV--RVKYNLFAGGKDLAREKESAYKLSEAKEIRQRAQREVVEGVNLAWN 372
            G   +D  A V  R++  ++ GG +  + +++   L + + +   A+  V + V  A  
Sbjct: 288 AGQGLDDTTASVTARLEVPIYQGGAEYGQIRQAKEILGQQRILVDSARASVQQTVVSAHA 347

Query: 373 AYEMLAPQKQYIRDHVIAAKDTQSAYAQQFNLGQRSLLDLLDTENELFEARKDYLQAEYD 432
             E    + +  R  + AA        ++  +GQR+ LD+L ++ ++ +A++    A+ D
Sbjct: 348 QLESALARIRASRSQIAAANLALEGVVEERKVGQRTTLDVLISQQDVLDAQEALAGAQRD 407

Query: 433 ETIAKYRVLNSTGRLLDSLKVTRPEAWRGERNYE 466
             +A Y +L + G L    +  +   +R E +YE
Sbjct: 408 AVVASYALLAAMGHLTVRSQGLQVAEYRAEEHYE 441