Pairwise Alignments

Query, 471 a.a., agglutination protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 451 a.a., TolC family outer membrane protein from Pantoea sp. MT58

 Score =  115 bits (287), Expect = 4e-30
 Identities = 111/433 (25%), Positives = 191/433 (44%), Gaps = 37/433 (8%)

Query: 29  SQTLEQAVAHTLDTNPDLRVAFNRFKAREEQVNQAIAGYMPTVDLTGGYGYE-QTDSVST 87
           S TL  A+      NP +  A  +    E  ++ A + + P + L G  G   QTDS  +
Sbjct: 44  SLTLRDAILRAFARNPKISEAAAQIHVGEGDLDAARSAWYPQISLQGAAGRSHQTDSAGS 103

Query: 88  RRRKNVGDVDSNGVAELNRGEFGISLKQMLFDGFYTSSEVDRYSFEASADQWALLAAAED 147
                            N G  GI+L Q+L+D   T S +D     + A ++ L  +   
Sbjct: 104 LN---------------NNGSGGITLSQLLYDFGRTGSAIDEQHALSEAYRFGLFDSMTT 148

Query: 148 MALDVSKAYLNYLRTDEVLKLAEKNLNSHKEIYDQIKQRTDSGLGSTADLSQISGRLARA 207
           +A D  +AYL   R   +  +A  N+ S + + D  K R D+GL S +D+ Q   R+A  
Sbjct: 149 VAEDTLQAYLEVKRYQALADIAHTNIASLQRVRDIAKLRADAGLNSQSDVLQAETRIAAM 208

Query: 208 NANVISARNNLLDAKAQFVRVVAADPVDLIQPVPDADMLPKDLNSSIADAEKNHPILKSA 267
            A +   R  L  A AQ   +    P  L + +P A  L K   +    A ++   ++SA
Sbjct: 209 QATLEQYRAQLRSATAQLTVLTGVVPATLPE-LPQA--LLKQQITLDKIAYESSAAVRSA 265

Query: 268 ANDIRAAENERSSTQANYYPQVSLELNGS-WNNDVGGEDGVSAIASQNVGGYSNDIVAMV 326
            +   AA       Q+ ++P + ++   + + ND                 Y +D V  +
Sbjct: 266 QSKQEAARERVRQAQSGHWPTIKVQAGRTRYEND--------------RQSYWDDEV-QL 310

Query: 327 RVKYNLFAGGKDLAREKESAYKLSEAKEIRQRAQREVVEGVNLAWNAYEMLAPQKQYIRD 386
           +V+  L+ GG   A+ + +      A+   Q+A+  + +  + A+ A  + A Q+Q   +
Sbjct: 311 QVEAPLYQGGMVNAKTESAEGDREAAQAAVQQAKLAINQNASTAY-ADMIGAQQRQAAGE 369

Query: 387 HVIAAKD-TQSAYAQQFNLGQRSLLDLLDTENELFEARKDYLQAEYDETIAKYRVLNSTG 445
             +A+ D T++ YA ++ L +RSL DLL  E ++F+A    + A YD   A  R   +  
Sbjct: 370 VQLASADHTRNVYADEYRLSKRSLNDLLSVEQDVFQADSSRITALYDGWDATVRYAAAVD 429

Query: 446 RLLDSLKVTRPEA 458
            LLD + + R ++
Sbjct: 430 NLLDIMGIDRQQS 442