Pairwise Alignments

Query, 471 a.a., agglutination protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 488 a.a., outer membrane channel protein TolC from Pantoea sp. MT58

 Score = 99.8 bits (247), Expect = 2e-25
 Identities = 98/425 (23%), Positives = 176/425 (41%), Gaps = 19/425 (4%)

Query: 26  SAQSQTLEQAVAHTLDTNPDLRVAFNRFKAREEQVNQAIAGYMPTVDLTGGYGYEQTDSV 85
           ++Q++ L Q       +NPDLR A     +  E++N+A +  +P + L   Y Y      
Sbjct: 19  ASQAEDLLQVYQQARLSNPDLRSAAADRDSAFEKINEARSPLLPQLGLGADYAY------ 72

Query: 86  STRRRKNVGDVDSNGVAELNRGEFGISLKQMLFDGFYTSSEVDRYSFEASADQWALLAAA 145
                 N G  DS+G+   N     ++L Q +FD       +      A         A 
Sbjct: 73  ------NNGYRDSSGLHS-NTTSGSLNLTQTIFD-MSKWRALTLQEKTAGIQDVTYQVAQ 124

Query: 146 EDMALDVSKAYLNYLRTDEVLKLAEKNLNSHKEIYDQIKQRTDSGLGSTADLSQISGRLA 205
           +D+ L+ + AY N L+  + L   E    S     DQ  QR + GL +  D+     +  
Sbjct: 125 QDLILNTATAYFNVLKAIDTLSYTEAQKQSIYRELDQTTQRFNVGLVAITDVQNARAQYD 184

Query: 206 RANANVISARNNLLDAKAQFVRVVAADPVDLIQPVPDADML--PKDLNSSIADAEKNHPI 263
              AN ++ARNNL +      ++   D + L     D      P+ +++ +  AE  +  
Sbjct: 185 SVLANEVTARNNLDNNVETLRQITGMDYMSLASLSIDRFRTDKPEAVSALLKQAESRNLS 244

Query: 264 LKSAANDIRAAENERSSTQANYYPQVSLELN-GSWNNDVGGEDGVSAIASQNVGGYSNDI 322
           L SA  +   A  +  S +  + P + L  + G  N+  GG     +  S +    SN +
Sbjct: 245 LLSARLNQDLAREQIRSAETGHMPTLDLTASTGMSNSKYGGSRANQSQGSTDSITGSNQV 304

Query: 323 VAMVRVKYNLFAGGKDLAREKESAYKLSEAKEIRQRAQREVVEGVNLAWNAYEMLAPQKQ 382
                +   L++GG   ++ K++ Y    A E  + A R  V+ V  ++N          
Sbjct: 305 GLSFSLP--LYSGGSVTSQVKQAQYNFVSASEQLESAHRTAVQTVRSSFNNVNASISSIN 362

Query: 383 YIRDHVIAAKDTQSAYAQQFNLGQRSLLDLLDTENELFEARKDYLQAEYDETIAKYRVLN 442
             +  V++A+ +  A    + +G R+++D+LD    L+ A++    A Y   I +  +  
Sbjct: 363 AYKQAVVSAQSSLDASEAGYQVGTRTIVDVLDATTVLYNAKQQLSDARYSYLINQLNISY 422

Query: 443 STGRL 447
           + G L
Sbjct: 423 ALGTL 427