Pairwise Alignments

Query, 726 a.a., toxin secretion ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 788 a.a., putative ATP-binding/permease fusion ABC transporter from Phaeobacter inhibens DSM 17395

 Score =  340 bits (871), Expect = 2e-97
 Identities = 184/552 (33%), Positives = 320/552 (57%), Gaps = 6/552 (1%)

Query: 171 PIYR----DALIASVLVNIFALVSPLFIMNVYDKVVPNLAFDSLWVLAIGASIAYLFDLV 226
           P YR    + ++ S++ NI A+   LF + VYD+VVP+ +  +LWVLA+GA +A + + +
Sbjct: 235 PKYRRQVGEIMLGSLVANILAVSVALFSLQVYDRVVPHQSHATLWVLAVGAFLAIMLEAL 294

Query: 227 MRQLRSYLIDVAGKKVDIIVSSRLFAKAIGIPLEKRSPSIGGMAKQLGEFDSIREILTSA 286
           ++  R+ L D AG+++++ V + L  + IG+  +K+     G+   + +F S+RE  TS 
Sbjct: 295 LKLARARLTDAAGRQIELSVQNNLMRRLIGMRSDKKPLPPSGLFAAMRDFGSVREFFTST 354

Query: 287 TITTLVDLPFALFFLIVIYIVAGDLAVIPVVGGMIIIGFTLYTQPKLKAAIEEGNKFSSL 346
           TI+TL D+PF   FL+++  +AG +  I + GG++++    Y   K   A+    + ++ 
Sbjct: 355 TISTLADIPFIAVFLLLVASIAGPIVWIIIAGGILML-LPAYFMQKRMIALTRQTQGANA 413

Query: 347 KHGHLI-ESLSALESIKANGAEGIVQKSWQQMIGHSANWQLKSKKLSNSVSNTANFIVQF 405
           K G L+ E ++ L+++K+   E  V + W ++   S +   + ++LS+++++ +  + Q 
Sbjct: 414 KAGRLLHEVVNELDTLKSQRGEDRVLRLWDELNTLSTHAATEQRRLSSALTHWSQGVQQA 473

Query: 406 TVVCVVILGVYRVSDNLISMGGIIAAVMLSSRAIAPMAQLAGLMTRANHTASALRQLNEL 465
           T +  V++G   V     ++G IIA  +L+SR +AP+ Q A  + R ++   AL  L+ +
Sbjct: 474 TYIGSVVVGTLMVFAGEFTVGTIIATGILTSRTLAPLTQFAATLARWSNVKGALEGLDAI 533

Query: 466 MLQEDEFENKGHLVSKQRLIGKINADHVGFSYPGSEKPVLHPLSLTINPGERIAIIGRNG 525
                E E++   + +  L G+     V F Y     P L    + + PG+R+A++G NG
Sbjct: 534 ANSAQEKEDERSYLRRDSLQGRFELREVMFRYDEDGAPTLDVPGVAVTPGQRVAVLGVNG 593

Query: 526 SGKSTLAKLLVGLFQPTTGSLRYDGVDSAQIHPSDLRRNFGYLPQDVTLFHGTIRDNILF 585
           SGKSTL KL+ GL+ P  G +  DG D  QI P DLRR+ GYL QDV LF GT+R+N+  
Sbjct: 594 SGKSTLLKLMSGLYAPDRGRVMIDGTDMTQIDPRDLRRHIGYLSQDVRLFAGTLRENLNL 653

Query: 586 GTRQVTEHQLIRAVQLSGVSQFTHLEAEGLDQQVGEGGMSLSRGQRQTVALARATLNDPP 645
              +  + +L+ A+  +G+        +GLD ++ +GG  LS GQRQ++  AR  L +P 
Sbjct: 654 NQLERDDDRLMTALDFAGLGAHVRNHHKGLDLEIFDGGGGLSIGQRQSIGWARLWLQNPS 713

Query: 646 VLLMDEPTASLDARAEQQFIRSMQNVSKDRTLLLITHKMHLLQLVDRIIVLERGHVVADG 705
           ++L+DEPTA+LD   E+  +  ++   + RT ++ TH+M +L L +R ++L+ G +V DG
Sbjct: 714 IVLLDEPTAALDQTLERTLVSRLETWLEGRTTVIATHRMPILSLTNRTLILQSGRMVVDG 773

Query: 706 PKAEVLEKLNFG 717
           P+ +VL  L  G
Sbjct: 774 PRDQVLAHLAAG 785