Pairwise Alignments

Query, 310 a.a., porphobilinogen deaminase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 321 a.a., Porphobilinogen deaminase (NCBI) from Rhodospirillum rubrum S1H

 Score =  232 bits (591), Expect = 1e-65
 Identities = 134/306 (43%), Positives = 183/306 (59%), Gaps = 9/306 (2%)

Query: 1   MSENRIRIATRKSPLAMWQAEFVKAELERIHPGI----VVELLPMSTKGDVILDTPLAKV 56
           + ++++RI TR SPLA+ Q   V+  L   +P +     V +  + T GD ILD PL+++
Sbjct: 5   IEKSKLRIGTRGSPLALAQTHQVRDLLIAANPDLGEPGAVTIEVIKTTGDAILDRPLSEL 64

Query: 57  GGKGLFVKELEVAMLEDQADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNIYKSI 116
           GGKGLF +E++ AML    DIAVHSMKDVP   P+G+ L  + ERED RDAF+   +  +
Sbjct: 65  GGKGLFTREIDDAMLAGTIDIAVHSMKDVPTYLPDGIVLPCMLEREDVRDAFLGRDHARL 124

Query: 117 SELPLGATVGTSSLRRQCQLRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIR 176
           ++LP G+ VGT+SLRR  Q+ A RPD+ +   RGNV TRL KL  GE DA +LA AGL R
Sbjct: 125 ADLPEGSVVGTASLRRGAQILAMRPDIKVISFRGNVQTRLDKLARGEADATMLAIAGLNR 184

Query: 177 LKLSERIASFISAEESLPANGQGAVGIECRTNDERVKALLAPLEHLETRYRVIAERAMNT 236
           L ++++ +S +  +E LPA  QGAVG+ CR  DE     LAPL H  T+  V  ERA  T
Sbjct: 185 LGMADKASSVLEIDEMLPAVAQGAVGVTCRAGDETAHRWLAPLNHRATQLCVEIERAFLT 244

Query: 237 RLEGGCQVPIGAFAEIDGDE-----MTLRGLVGNPDGSEIIEGVITGPKTEATQLGVALA 291
           RL+G C+ PIG  A +   E     +  RG++   DG  I +    G   +   LG    
Sbjct: 245 RLDGSCRTPIGGLARLKRVEDPSGTVFFRGMIIRTDGKVIHQTTREGLAADGIALGDDAG 304

Query: 292 EELLSK 297
            ELL+K
Sbjct: 305 AELLAK 310