Pairwise Alignments

Query, 310 a.a., porphobilinogen deaminase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 326 a.a., hydroxymethylbilane synthase from Rhodopseudomonas palustris CGA009

 Score =  160 bits (405), Expect = 4e-44
 Identities = 108/317 (34%), Positives = 165/317 (52%), Gaps = 18/317 (5%)

Query: 6   IRIATRKSPLAMWQAEFVKAELERIHPGIVVELLPMSTKGDVILDTPLAKVGGKG-LFVK 64
           +RI TRKS +A+ Q E +  +L      +  +++   T GD    + L   GGKG  FV 
Sbjct: 5   VRIGTRKSVMALAQTEDIAKQLSAAASELDPQIIKFETVGDSDQISKLLPHGGKGGAFVA 64

Query: 65  ELEVAMLEDQADIAVHSMKDVPV-DFPEGLGLEVICEREDPRDAFVSNIYKSISELPL-- 121
           E+  AML  +   A+HS+KD+P  +   GL +     R+   D+ V     ++ EL    
Sbjct: 65  EIRAAMLRGELHCAMHSLKDMPANEETPGLIVAATLARDPACDSLVLRKGLTLEELKKSR 124

Query: 122 --GATVGTSSLRRQCQLRASRPDLIIKDLRGNVGTRLAKLDN------------GEYDAI 167
             G T+GT+++RR    +   P++ +   RG   +R+ KLDN            G  DA+
Sbjct: 125 GKGYTIGTNAVRRAAYAKRLFPEVEVIHFRGAADSRMRKLDNREKQRMPDGSEVGPADAL 184

Query: 168 ILAAAGLIRLKLSERIASFISAEESLPANGQGAVGIECRTNDERVKALLAPLEHLETRYR 227
           I+A AG+ R+   +RIA   + EE LPA GQG V +EC  ++ + +  LA +++ ++R  
Sbjct: 185 IMARAGIERVGFVDRIAHDFTPEEMLPAAGQGIVAVECPVHEWKTRQYLALIDNHQSRLC 244

Query: 228 VIAERAMNTRLEGGCQVPIGAFAEIDGDEMTLRGLVGNPDGSEIIEGVITGPKTEATQLG 287
             AER +   L G C  PI A + I GDEMTLR  V + +G   IE   TGP     +LG
Sbjct: 245 CDAEREVLWVLNGHCNSPIAAHSVITGDEMTLRASVLDLEGGMFIEAARTGPANRPRELG 304

Query: 288 VALAEELLSKGAKSILD 304
             +  ELL KGA ++++
Sbjct: 305 RTVGLELLDKGAAAVIE 321