Pairwise Alignments

Query, 310 a.a., porphobilinogen deaminase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 527 a.a., hydroxymethylbilane synthase from Pedobacter sp. GW460-11-11-14-LB5

 Score =  172 bits (437), Expect = 1e-47
 Identities = 106/254 (41%), Positives = 148/254 (58%), Gaps = 10/254 (3%)

Query: 5   RIRIATRKSPLAMWQAEFVKAELERIHPGIVVELLPMSTKGDVILDTPLAKVGGKGLFVK 64
           ++ I TR S LA+WQA  +K EL  I  GI  E+  + T+GD IL+  L K+ GKG F K
Sbjct: 4   KLTIGTRGSDLALWQANHIKDELAAI--GIEAEIKIIKTQGDKILNLRLDKLEGKGFFTK 61

Query: 65  ELEVAMLEDQADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVS-----NIYKSISEL 119
           ELE  +L    D+AVH +KD+P   PEGL +  +  RE+  +  +      ++ + +S L
Sbjct: 62  ELEEELLGGTIDLAVHCLKDLPTAHPEGLIIAALPPREEASEYLLILKDCVDVSQKLS-L 120

Query: 120 PLGATVGTSSLRRQCQLRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLKL 179
             GA VGTSS RR+ QL   RPDL ++DLRGNV TR+ KL + +YDAI++A AG+ RL L
Sbjct: 121 KKGAMVGTSSNRRKAQLLGLRPDLEVEDLRGNVPTRIQKLRDEDYDAILIAKAGVKRLNL 180

Query: 180 --SERIASFISAEESLPANGQGAVGIECRTNDERVKALLAPLEHLETRYRVIAERAMNTR 237
             S+     +   E +PA  QGA+ I+ R ND  +   L  L   ET   V  ER +   
Sbjct: 181 DVSDLHVEELETTEFIPAPAQGALAIQIRENDTELFDALQKLHDPETAETVTVERKVLNL 240

Query: 238 LEGGCQVPIGAFAE 251
            EGGC +P+G + +
Sbjct: 241 FEGGCHMPLGCYCK 254