Pairwise Alignments

Query, 310 a.a., porphobilinogen deaminase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 309 a.a., Probable porphobilinogen deaminase HemC (PBG) (hydroxymethylbilane synthase) (HMBS) (pre-uroporphyrinogen synthase) from Mycobacterium tuberculosis H37Rv

 Score =  201 bits (510), Expect = 2e-56
 Identities = 130/307 (42%), Positives = 177/307 (57%), Gaps = 13/307 (4%)

Query: 6   IRIATRKSPLAMWQAEFVKAELERIHPGIVVELLPMSTKGDVILDTPLAKVGGKGLFVKE 65
           IRI TR S LA  QA  V+  L  I  G   EL+ +ST+GD  +  P+A +G  G+F   
Sbjct: 2   IRIGTRGSLLATTQAATVRDAL--IAGGHSAELVTISTEGDRSM-APIASLG-VGVFTTA 57

Query: 66  LEVAMLEDQADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNIYKSISELPLGATV 125
           L  AM     D AVHS KD+P        +  I  R DPRDA V+    ++ ELP+G+ V
Sbjct: 58  LREAMEAGLVDAAVHSYKDLPTAADPRFTVAAIPPRNDPRDAVVARDGLTLGELPVGSLV 117

Query: 126 GTSSLRRQCQLRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLKLSERIAS 185
           GTSS RR  QLRA    L I+ LRGN+ TRL K+ +G+ DAI++A AGL RL   + +  
Sbjct: 118 GTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNKVSSGDLDAIVVARAGLARLGRLDDVTE 177

Query: 186 FISAEESLPANGQGAVGIECRTNDERVKALLAPLEHLETRYRVIAERAMNTRLEGGCQVP 245
            +   + LPA  QGA+ +ECR  D R+ A+LA L+  +TR  V AERA+   LE GC  P
Sbjct: 178 TLEPVQMLPAPAQGALAVECRAGDSRLVAVLAELDDADTRAAVTAERALLADLEAGCSAP 237

Query: 246 IGAFAEI------DG---DEMTLRGLVGNPDGSEIIEGVITGPKTEATQLGVALAEELLS 296
           +GA AE+      DG   +E++LRG V   DGS++I     G    A +LG+++A EL  
Sbjct: 238 VGAIAEVVESIDEDGRVFEELSLRGCVAALDGSDVIRASGIGSCGRARELGLSVAAELFE 297

Query: 297 KGAKSIL 303
            GA+ ++
Sbjct: 298 LGARELM 304