Pairwise Alignments

Query, 310 a.a., porphobilinogen deaminase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 318 a.a., porphobilinogen deaminase from Herbaspirillum seropedicae SmR1

 Score =  291 bits (746), Expect = 1e-83
 Identities = 156/307 (50%), Positives = 199/307 (64%)

Query: 4   NRIRIATRKSPLAMWQAEFVKAELERIHPGIVVELLPMSTKGDVILDTPLAKVGGKGLFV 63
           + I I +R+S LAMWQAE+V+  L  ++P   + +L  +T+GD ILD  L+KVGGKGLFV
Sbjct: 7   SNIVIVSRESRLAMWQAEYVRDRLAALYPQCSISILGTTTRGDQILDRALSKVGGKGLFV 66

Query: 64  KELEVAMLEDQADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNIYKSISELPLGA 123
           KELEVAM E +AD+AVH +KD+P+D PEG  L  I EREDPRDAFVSN Y ++ ELP GA
Sbjct: 67  KELEVAMAEGRADLAVHCLKDMPMDLPEGFELAAILEREDPRDAFVSNDYAALDELPDGA 126

Query: 124 TVGTSSLRRQCQLRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLKLSERI 183
            VGTSSLRRQ  + A  P L++K LRGN+ TRLAKLD G+Y AIILA AGL RL L  RI
Sbjct: 127 VVGTSSLRRQAMIAARYPQLVVKPLRGNLDTRLAKLDRGDYAAIILAVAGLNRLGLKARI 186

Query: 184 ASFISAEESLPANGQGAVGIECRTNDERVKALLAPLEHLETRYRVIAERAMNTRLEGGCQ 243
            SF+   +SLP+ GQG + IE     E +K LLAPL          AER+++      CQ
Sbjct: 187 RSFLDPAQSLPSPGQGTLAIEIPEGREDIKRLLAPLHDEPAAVVSAAERSVSRIFGASCQ 246

Query: 244 VPIGAFAEIDGDEMTLRGLVGNPDGSEIIEGVITGPKTEATQLGVALAEELLSKGAKSIL 303
           +P+ A+A +DG  + LR ++  PDG         GP      LG  +AE L ++GA  IL
Sbjct: 247 IPLAAYATLDGQRLHLRAMIATPDGLHAAAAEAEGPAAAPEALGAQVAELLKARGADDIL 306

Query: 304 DAVYAKA 310
            A  A+A
Sbjct: 307 AACKAQA 313