Pairwise Alignments

Query, 310 a.a., porphobilinogen deaminase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 338 a.a., hydroxymethylbilane synthase from Ralstonia sp. UNC404CL21Col

 Score =  306 bits (784), Expect = 4e-88
 Identities = 173/311 (55%), Positives = 220/311 (70%), Gaps = 6/311 (1%)

Query: 5   RIRIATRKSPLAMWQAEFVKAELERIHPGIVVELLPMSTKGDVILDTPLAKVGGKGLFVK 64
           ++ IA+R+S LA+WQAE V+A L++ +P   V +L M+T+GD ILD  LAKVGGKGLFVK
Sbjct: 25  KLVIASRESRLALWQAEHVRAALQKYYPACDVSILGMTTRGDQILDRSLAKVGGKGLFVK 84

Query: 65  ELEVAMLEDQADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNIYKSISELPLGAT 124
           ELEVA+ E +AD+AVHS+KDVP++ PEG  L  I EREDPRDAFVSN Y  ++ LP GA 
Sbjct: 85  ELEVALAEGRADLAVHSLKDVPMELPEGFALSTILEREDPRDAFVSNDYADLASLPAGAV 144

Query: 125 VGTSSLRRQCQLRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLKLSERIA 184
           VGTSSLRR+  LRA  P L+I+ LRGN+ TRL KLD G+Y AIILAAAGL RL L +RI 
Sbjct: 145 VGTSSLRREASLRARFPHLVIQPLRGNLDTRLGKLDRGDYAAIILAAAGLKRLGLVDRIR 204

Query: 185 SFISAEESLPANGQGAVGIECRTNDERVKALLAPLEHLETRYRVIAERAMNTRLEGGCQV 244
           S I+ EESLPA GQGA+GIE R + E V+A LAPL    T   V AERA++  L G CQV
Sbjct: 205 STIAPEESLPAAGQGALGIEIRADREDVRACLAPLHDAPTALAVTAERAVSRILGGSCQV 264

Query: 245 PIGAFAE-IDGDEMTLRGLVGNPDGSEII--EGVITGPKT--EATQLGVALAEELLSKGA 299
           P+ +FA+  D   + LR  V + DG+  +  +G  T P T  EA  LGV +A+++L+ GA
Sbjct: 265 PLASFAQWSDAGALRLRAFVASQDGTRKLAADGEAT-PSTLAEADALGVRVAQQMLAGGA 323

Query: 300 KSILDAVYAKA 310
           + IL  + A A
Sbjct: 324 RDILAMLGADA 334