Pairwise Alignments

Query, 310 a.a., porphobilinogen deaminase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 342 a.a., porphobilinogen deaminase from Burkholderia phytofirmans PsJN

 Score =  290 bits (741), Expect = 4e-83
 Identities = 157/304 (51%), Positives = 203/304 (66%), Gaps = 3/304 (0%)

Query: 8   IATRKSPLAMWQAEFVKAELERIHPGIVVELLPMSTKGDVILDTPLAKVGGKGLFVKELE 67
           IA+R+S LAMWQAE V+  L +++P   V++L M+T+GD ILD  L+KVGGKGLFVKELE
Sbjct: 15  IASRESRLAMWQAEHVRCALHKLYPSCDVKILGMTTRGDQILDRTLSKVGGKGLFVKELE 74

Query: 68  VAMLEDQADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNIYKSISELPLGATVGT 127
            A+ + +AD+AVHS+KDVP++ P G  L  I EREDPRDA VSN Y S++ LP GA VGT
Sbjct: 75  AALADGRADLAVHSLKDVPMELPAGFALSTIMEREDPRDALVSNDYDSLAALPAGAVVGT 134

Query: 128 SSLRRQCQLRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLKLSERIASFI 187
           SSLRR+  LR   P L ++ LRGN+ TRL+KLD G+Y AIILAAAGL RL L ERI + +
Sbjct: 135 SSLRREAMLRMRYPHLEVRPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLGERIRALL 194

Query: 188 SAEESLPANGQGAVGIECRTNDERVKALLAPLEHLETRYRVIAERAMNTRLEGGCQVPIG 247
             E+SLPA GQGA+GIE R +   + A LAPL H  T   V AER ++  L G C+VP+ 
Sbjct: 195 DPEDSLPAAGQGALGIEIRADRADLAAWLAPLHHDHTAAAVEAERMVSRALGGSCEVPLA 254

Query: 248 AFAEIDGDEMTLRGLVGNPDGSEIIEGVITGPK---TEATQLGVALAEELLSKGAKSILD 304
           A+A      + LRG+V  PDG  ++    + P      A  LG  +A  L  +GA  I+ 
Sbjct: 255 AYATWRDGALHLRGIVATPDGQRVLSAQASAPAPSVERAVALGQEVASALEQQGAMDIVR 314

Query: 305 AVYA 308
           A+ A
Sbjct: 315 ALSA 318