Pairwise Alignments

Query, 299 a.a., integrase/recombinase XerC (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 299 a.a., tyrosine recombinase XerC subunit from Pseudomonas syringae pv. syringae B728a

 Score =  245 bits (625), Expect = 1e-69
 Identities = 140/299 (46%), Positives = 194/299 (64%), Gaps = 18/299 (6%)

Query: 8   YLQQFEAYMQSERQLSAHTVRNYLYEL-------QRGRELLPEGIDLLNVGREHWQQVLA 60
           +L  +  +++SERQ+S HT+  Y  +L       Q+ +      +D+     +H +   A
Sbjct: 4   HLDAYCMHLRSERQVSPHTLEAYRRDLGKVLAYCQKAQVSSWSDLDI-----QHLRSFTA 58

Query: 61  KLHRKGLSPRSLSLWLSAVKQWGEFLLRAGAIELNPAKGLSAPKQAKPLPKNIDVDSLTH 120
           + H++G S RSL+  LSAV+ + ++L R G  + +PA GLS PK  + LPK +D D    
Sbjct: 59  RQHQQGQSSRSLARMLSAVRGFYKYLNREGICQHDPANGLSPPKGERRLPKTLDTDRAAQ 118

Query: 121 LLEIDG---NDPLTLRDKAIMELFYSSGLRLAELAALDLSSVQYDQREVRVLGKGNKERI 177
           LL  DG   +D L  RD+AI+EL YSSGLRL+EL  L+L  +      V+VLGKG+K R+
Sbjct: 119 LL--DGGVEDDFLAHRDQAILELLYSSGLRLSELTGLNLDQLDLRDGLVQVLGKGSKTRV 176

Query: 178 VPVGRYAIDAISAWLECRRQIPCEDNALFVTEKGKRLSHRSIQARMSKWGQEQALSMRVH 237
           +PVG  A  A+  WL  R     +D+A+FV+++GKRL  R+IQ R+   G E+ L   +H
Sbjct: 177 LPVGSKARQALEVWLPLRALTNPQDDAVFVSQQGKRLGPRAIQVRLKAAG-ERELGQNLH 235

Query: 238 PHKLRHSFATHMLESSADLRAVQELLGHENLSTTQIYTSLDFQHLAKVYDNAHPRAKKQ 296
           PH LRHSFA+H+LESS DLRAVQELLGH ++ TTQIYT LDFQHLA VYD+AHPRAK++
Sbjct: 236 PHMLRHSFASHLLESSQDLRAVQELLGHADIKTTQIYTHLDFQHLATVYDSAHPRAKRK 294