Pairwise Alignments

Query, 299 a.a., integrase/recombinase XerC (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 311 a.a., Probable integrase/recombinase from Mycobacterium tuberculosis H37Rv

 Score =  183 bits (464), Expect = 5e-51
 Identities = 117/304 (38%), Positives = 171/304 (56%), Gaps = 18/304 (5%)

Query: 9   LQQFEAYMQSERQLSAHTVRNYLYELQRGRELLPE-GI-DLLNVGREHWQQVLAKLHR-- 64
           LQ +  ++  ER ++A+T+ +Y  +L+R  + L E GI DL  VG     + L  L R  
Sbjct: 8   LQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVALRRGD 67

Query: 65  -----KGLSPRSLSLWLSAVKQWGEFLLRAGAIELNPAKGLSAPKQAKPLPKNIDVDSLT 119
                  LS  S +  L AV+    F    G  EL+ A+ +  P  ++ LPK++ +D + 
Sbjct: 68  PDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLTIDEVL 127

Query: 120 HLLEIDGND-----PLTLRDKAIMELFYSSGLRLAELAALDLSSVQYDQREVRVLGKGNK 174
            LLE  G D     PLTLR++A++EL YS+G R++E   LDL  +    R V + GKG K
Sbjct: 128 SLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLRGKGGK 187

Query: 175 ERIVPVGRYAIDAISAWLECRRQIPCEDN----ALFVTEKGKRLSHRSIQARMSKWGQEQ 230
           +R+VPVGR A+ A+ A+L   R           A+F+  +G RLS +S    +    +  
Sbjct: 188 QRLVPVGRPAVHALDAYLVRGRPDLARRGRGTAAIFLNARGGRLSRQSAWQVLQDAAERA 247

Query: 231 ALSMRVHPHKLRHSFATHMLESSADLRAVQELLGHENLSTTQIYTSLDFQHLAKVYDNAH 290
            ++  V PH LRHSFATH+LE  AD+R VQELLGH +++TTQIYT +    L +V+  AH
Sbjct: 248 GITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVWAGAH 307

Query: 291 PRAK 294
           PRA+
Sbjct: 308 PRAR 311