Pairwise Alignments

Query, 299 a.a., integrase/recombinase XerC (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 328 a.a., tyrosine recombinase XerC from Ralstonia sp. UNC404CL21Col

 Score =  259 bits (662), Expect = 6e-74
 Identities = 148/311 (47%), Positives = 204/311 (65%), Gaps = 25/311 (8%)

Query: 11  QFEAYMQS---ERQLSAHTVRNYLYELQRGRELLPEG---IDLLNVGREHWQQVLAKLHR 64
           Q  AY+ +   ERQLS HT+ +Y  EL   + L  +    +DL  +   H ++++A+LH 
Sbjct: 18  QIAAYLDALKFERQLSPHTLESYTRELAVLQRLGAQHAAIVDLTQLQSHHIRRMMAQLHG 77

Query: 65  KGLSPRSLSLWLSAVKQWGEFL-LRAGAIELNPAKGLSAPKQAKPLPKNIDVDSLTHLLE 123
            GLS RS++  LSA + W +++ LR  A+  NP  G+ APK  K LPK + V+    L+E
Sbjct: 78  DGLSGRSIARALSAWRGWFKWMALRDAAVTANPVDGVRAPKSPKRLPKALSVEQAVALME 137

Query: 124 -IDGNDPLTLRDKAIMELFYSSGLRLAELAALDLSSVQ-----------YDQREVRVLGK 171
            + G+D  T+RD+A+ ELFYS GLRL+EL +LD+  V+            + REV+VLGK
Sbjct: 138 QLPGDDAETVRDRAVNELFYSCGLRLSELVSLDMRHVKAGAYESASWLDLEAREVQVLGK 197

Query: 172 GNKERIVPVGRYAIDAISAWLECRRQI------PCEDNALFVTEKGKRLSHRSIQARMSK 225
           G+K R VPVG  A +A++AWL  R Q+      P + +ALF++ +GKRL+ R IQ RM +
Sbjct: 198 GSKRRTVPVGTKAAEALAAWLAVREQLAKPDAAPEDAHALFLSPRGKRLAQRQIQLRMKR 257

Query: 226 WGQEQALSMRVHPHKLRHSFATHMLESSADLRAVQELLGHENLSTTQIYTSLDFQHLAKV 285
                 +   VHPH LRHSFATHML+SS DLRAVQELLGH ++++TQ+YTSLDFQHLAK+
Sbjct: 258 NAIAAGVPADVHPHVLRHSFATHMLQSSGDLRAVQELLGHASIASTQVYTSLDFQHLAKI 317

Query: 286 YDNAHPRAKKQ 296
           YD AHPRAKK+
Sbjct: 318 YDQAHPRAKKK 328