Pairwise Alignments

Query, 299 a.a., integrase/recombinase XerC (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 299 a.a., tyrosine recombinase XerC (RefSeq) from Shewanella sp. ANA-3

 Score =  566 bits (1459), Expect = e-166
 Identities = 279/299 (93%), Positives = 290/299 (96%)

Query: 1   MPARCHSYLQQFEAYMQSERQLSAHTVRNYLYELQRGRELLPEGIDLLNVGREHWQQVLA 60
           M  +C SYLQQFE YMQSERQLSAHTVRNY+YELQRG ELLPEG+DLLNVGREHWQQVLA
Sbjct: 1   MTPQCQSYLQQFETYMQSERQLSAHTVRNYMYELQRGSELLPEGVDLLNVGREHWQQVLA 60

Query: 61  KLHRKGLSPRSLSLWLSAVKQWGEFLLRAGAIELNPAKGLSAPKQAKPLPKNIDVDSLTH 120
           KLHRKGLSPRSLSLWLSA+KQWGEFLLR+G IELNPAKGLSAPKQAKPLPKNIDVDS++H
Sbjct: 61  KLHRKGLSPRSLSLWLSAIKQWGEFLLRSGVIELNPAKGLSAPKQAKPLPKNIDVDSISH 120

Query: 121 LLEIDGNDPLTLRDKAIMELFYSSGLRLAELAALDLSSVQYDQREVRVLGKGNKERIVPV 180
           LL I+GNDPLTLRDKAIMELFYSSGLRLAELAALDLSSVQYDQ EVRVLGKGNKERIVPV
Sbjct: 121 LLAIEGNDPLTLRDKAIMELFYSSGLRLAELAALDLSSVQYDQHEVRVLGKGNKERIVPV 180

Query: 181 GRYAIDAISAWLECRRQIPCEDNALFVTEKGKRLSHRSIQARMSKWGQEQALSMRVHPHK 240
           GRYAI+AISAWL+CR+QI CEDNALFVTEKGKRLSHRSIQARMSKWGQEQALSMRVHPHK
Sbjct: 181 GRYAIEAISAWLKCRKQISCEDNALFVTEKGKRLSHRSIQARMSKWGQEQALSMRVHPHK 240

Query: 241 LRHSFATHMLESSADLRAVQELLGHENLSTTQIYTSLDFQHLAKVYDNAHPRAKKQQDK 299
           LRHSFATHMLESSADLRAVQELLGHENLSTTQIYTSLDFQHLAKVYDNAHPRAKKQQDK
Sbjct: 241 LRHSFATHMLESSADLRAVQELLGHENLSTTQIYTSLDFQHLAKVYDNAHPRAKKQQDK 299