Pairwise Alignments

Query, 401 a.a., NupC family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 419 a.a., nucleoside transporter (RefSeq) from Shewanella amazonensis SB2B

 Score =  405 bits (1041), Expect = e-117
 Identities = 209/418 (50%), Positives = 292/418 (69%), Gaps = 20/418 (4%)

Query: 1   MIQSILGIFVLLGVGLLFSDNRSLISWRAVIGAFGIIIALAFFVLATEIGADVLLAVSNT 60
           ++ S++G+ VLLG+G L S+N+  IS RAV GA  I  A   FVL    G D+L  VS+ 
Sbjct: 3   ILMSLVGVAVLLGIGFLLSNNKKAISVRAVGGALAIQAAFGGFVLYVPWGKDILKTVSDG 62

Query: 61  VGKVFGYGTEGIKFAFGSLVNFSVEGIGFVWALQVLPQIIFTAALTSLLYYLGIMQWFVL 120
           V  V GYG  GI F FG L  F V   GF++A+ VLP IIF ++L ++LYYLGIMQW + 
Sbjct: 63  VSAVIGYGQNGINFLFGDLAQFKV---GFIFAINVLPVIIFFSSLIAVLYYLGIMQWVIR 119

Query: 121 IIGGSLQKVLGTSRAESMNAAGNIILGQTEAPLLIKPYHRVLTRAQIFAVMVGGLSSIAG 180
           IIGG LQK LGTSR ESM+A  NI +GQTEAPL+++P+   +T++++FA+MVGGL+SIAG
Sbjct: 120 IIGGGLQKALGTSRTESMSATANIFVGQTEAPLVVRPFIPTMTQSELFAIMVGGLASIAG 179

Query: 181 SILAGLAGMGVALNYLIMACFMSAPAGLMFAKLLIPETEPTVNEVPELPDD-EKPSSFID 239
           S+LAG A MGV + YL+ A FM+AP GL+ AKL+ PETE T NE+ ELP+D +KP++ +D
Sbjct: 180 SVLAGYASMGVKIEYLVAASFMAAPGGLLMAKLMHPETENTKNEMDELPEDPDKPANVLD 239

Query: 240 AIAKGAIAGMGIAAIVGAVIIACIGLMALLNGGLGAIGELFGMPTLTVDMILGTLFAPVA 299
           A A GA +GM +A  VGA++IA +GL+A++NG +G +G  FG+  LT+++ILG +F P+A
Sbjct: 240 AAAAGASSGMHLALNVGAMLIAFVGLIAMINGIIGGVGGWFGVEGLTLELILGYIFMPLA 299

Query: 300 WLIGIPWVEASTAGAFLGQKIAMNEFVAFANMG----------------NVELSARSNAI 343
           +LIG+PW EA  AG+F+GQKI +NEFVA+ N                     +S R+ AI
Sbjct: 300 FLIGVPWNEALVAGSFIGQKIVVNEFVAYLNFAPYLKDIADGGIVVAETGAAMSDRTKAI 359

Query: 344 MTIALCGFANIGSVAMVCGALSKMIPQRAGLIGQLGMKVLLAATLANLMNAAIVSLFI 401
           ++ ALCGFAN+ S+A++ G L  M P R   + +LG++ ++A +LANLM+A +  LF+
Sbjct: 360 VSFALCGFANLSSIAILLGGLGAMAPNRRHDLAKLGIRAVIAGSLANLMSATLAGLFL 417