Pairwise Alignments

Query, 244 a.a., chemotaxis motA protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 246 a.a., flagellar motor protein from Dyella japonica UNC79MFTsu3.2

 Score =  171 bits (433), Expect = 1e-47
 Identities = 95/242 (39%), Positives = 143/242 (59%)

Query: 1   MSFIGVIVALVFILVGNLIEGGHPSALLDLPAFMIVIGGTIGATVAQFPFSVIIASMKRF 60
           +S +G I+A V +++G +++G    AL +  AF+IV  GTI A + Q    V+  ++   
Sbjct: 4   VSIVGTILAFVVVILGTILKGSSVEALWNPAAFVIVFAGTIAALLVQTQGKVLKHAIGML 63

Query: 61  KWLIFPLRTDLNERAEFLIEIAGDVRKGGLLSIEDKIDQIDDPFLHKGLELLVDGYEKDN 120
             +  P R   N+    +I  +   R+ GLL +E +ID   DPF+ KGL+LLVDG E + 
Sbjct: 64  PMIYKPPRHVPNDLISRVIGWSEISRRQGLLGLEPQIDSEQDPFVRKGLQLLVDGSEPEA 123

Query: 121 IVEILEKEIEFEQHGIEQTVKVYEAMGGYCPTMGIVGAVFGLIHAMGLLDAPDKLGGAIA 180
           I  +LE E +  +H      KV+E  G Y PTMGI+GAV GL+  M  L  P KLG  IA
Sbjct: 124 IRGVLEVEQDTREHQDLAGAKVFEQAGIYSPTMGIIGAVMGLMAVMQNLADPSKLGHGIA 183

Query: 181 VAFIATIYGVAAANIIFLPFGNRYKAFAHQLSLFKEMTLTGITGIADGESPQRLQAQLNP 240
            AF+ATIYGVA AN++ LP  +R K   H+    +E+ + G+  IA G++P++++++L  
Sbjct: 184 AAFVATIYGVALANLLMLPMSSRLKGMIHKQGKMREIIIEGLVSIARGDNPRQIESRLQG 243

Query: 241 YL 242
           YL
Sbjct: 244 YL 245