Pairwise Alignments

Query, 244 a.a., chemotaxis motA protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 252 a.a., chemotaxis protein MotA (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  151 bits (381), Expect = 1e-41
 Identities = 82/237 (34%), Positives = 132/237 (55%), Gaps = 1/237 (0%)

Query: 2   SFIGVIVALVFILVGNLIEGGHPSALLDLPAFMIVIGGTIGATVAQFPFSVIIASMKRFK 61
           + IG+ V+   I +  L+ GG P    DLPA +IV+GGTIGAT+  +P    +  +   +
Sbjct: 5   TLIGLAVSFGLIALALLL-GGDPLLFADLPALLIVLGGTIGATLVNYPIDEALRMLAIAR 63

Query: 62  WLIFPLRTDLNERAEFLIEIAGDVRKGGLLSIEDKIDQIDDPFLHKGLELLVDGYEKDNI 121
                 +T   E     ++++   R+ GLL++E  +  + DPF+ KGL+L VDG E + I
Sbjct: 64  HAFKGHQTSSEEVLNQFLDLSNRARREGLLALEPAVRTLPDPFMRKGLQLTVDGLEPEAI 123

Query: 122 VEILEKEIEFEQHGIEQTVKVYEAMGGYCPTMGIVGAVFGLIHAMGLLDAPDKLGGAIAV 181
            +IL  E+E  +   E    ++ AMG Y P +G++G V GL+  +  ++ P  +G A++V
Sbjct: 124 EDILRCEMENMETRHESGAAIFAAMGTYAPALGLIGTVIGLVQMLKRMNDPSTIGPAMSV 183

Query: 182 AFIATIYGVAAANIIFLPFGNRYKAFAHQLSLFKEMTLTGITGIADGESPQRLQAQL 238
           A I T YG   AN++FLP   + +  + Q     EM L GI  IA GE+P+ ++ +L
Sbjct: 184 ALITTFYGAVLANLVFLPLVGKLRHRSRQEIQLMEMQLAGILAIARGENPRIIREKL 240