Pairwise Alignments

Query, 244 a.a., chemotaxis motA protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 254 a.a., flagellar motor protein MotA from Burkholderia phytofirmans PsJN

 Score =  142 bits (358), Expect = 6e-39
 Identities = 78/238 (32%), Positives = 128/238 (53%)

Query: 1   MSFIGVIVALVFILVGNLIEGGHPSALLDLPAFMIVIGGTIGATVAQFPFSVIIASMKRF 60
           ++  G +  +  I+ G  +EGGH ++L  L AF+IV+GGT GA + Q  ++     +K+ 
Sbjct: 4   LTLFGAVFGVTAIVAGFSLEGGHFTSLFQLEAFVIVLGGTFGAVMIQNTWARFFDGIKQL 63

Query: 61  KWLIFPLRTDLNERAEFLIEIAGDVRKGGLLSIEDKIDQIDDPFLHKGLELLVDGYEKDN 120
           +      R    E    L+E     +  G+L  E       +PF  +GLELL +G     
Sbjct: 64  RLAFVKARQVDRESLSVLLEWGDQAKLNGMLVFESIEAGGINPFAKRGLELLANGVSTAV 123

Query: 121 IVEILEKEIEFEQHGIEQTVKVYEAMGGYCPTMGIVGAVFGLIHAMGLLDAPDKLGGAIA 180
           + + L++E++  +       ++++  GGY PT GI+GAV GLI   G +  P +LG  IA
Sbjct: 124 LEDALQRELDAYERNHMLAARIWQQAGGYAPTFGILGAVLGLIQVTGHMLEPAQLGQGIA 183

Query: 181 VAFIATIYGVAAANIIFLPFGNRYKAFAHQLSLFKEMTLTGITGIADGESPQRLQAQL 238
           VAF+AT+YG+A AN++FLP   + +A       F+ + L G+  I+  ESP  ++ +L
Sbjct: 184 VAFVATLYGLALANLVFLPLYGKIRAQVDSELRFRRLYLDGLLAISRKESPHTIETRL 241