Pairwise Alignments

Query, 287 a.a., conserved hypothetical protein TIGR00255 (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 295 a.a., YicC family protein from Rhodopseudomonas palustris CGA009

 Score =  167 bits (422), Expect = 3e-46
 Identities = 101/294 (34%), Positives = 162/294 (55%), Gaps = 9/294 (3%)

Query: 2   IQSMTAYARIEHKAQWGTASWEIRSVNQRYLETYLRLPEQFRSFEPVLRDRLRNRLSRGK 61
           + SMT +AR    +      WE++SVN +  +  +RLP  +   EP +R R    LSRG 
Sbjct: 3   LSSMTGFARSHGASGPYVFEWELKSVNAKGFDFRMRLPPGWDDIEPPVRKRAAEVLSRGT 62

Query: 62  VEVNLRYELADNSNNELKLNQGLAKQLLDAASWLKQEAGQGEVNLTDILRWPGVLSSAEQ 121
           +  NL  + A N+ + +++NQ +   +L  AS +  +      ++  +L   GV+   E 
Sbjct: 63  IYANLTVKRA-NAVSAIQINQDVLASVLKVASEIAGKVDAVAPSIDGLLGIKGVIEVVEP 121

Query: 122 DMD-----AIGADLMTAFDLAIDQFIEARGREGAAIKDMLLSRLD---GVSEQIAIVREH 173
           + D     A  A + +AF  A+   IE R REG+++  +L  RLD    +++Q       
Sbjct: 122 EADEAEEKAARAAVESAFGEALKSLIEMRKREGSSLAAVLAQRLDELEALAKQAEAAPGR 181

Query: 174 MPKVMEYQRDKLTNRLAEIKGELDPARIEQEMILLAQKQDVAEEMDRLEAHVNEARRILK 233
            P  ++ +  +    L +     D  R+ QE I++A K D+ EE+DR+ +H+ ++R +L 
Sbjct: 182 KPDAIKARLAEQIAALLDTSDRFDSDRLHQEAIMMATKADIREELDRIASHIAQSREMLA 241

Query: 234 KGGSEGRRLDFMMQEFNRESNTLASKSISTEITAAAVDLKVLIEQMREQIQNVE 287
           KGG+ GRRLDF+ QEFNRE NT  SKSI  E+T A + +K ++EQ REQ+QN+E
Sbjct: 242 KGGAVGRRLDFLAQEFNREVNTCCSKSIDLELTNAGLAMKNVVEQFREQVQNLE 295