Pairwise Alignments

Query, 287 a.a., conserved hypothetical protein TIGR00255 (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 298 a.a., TIGR00255 family protein from Phaeobacter inhibens DSM 17395

 Score =  187 bits (475), Expect = 2e-52
 Identities = 119/302 (39%), Positives = 175/302 (57%), Gaps = 22/302 (7%)

Query: 2   IQSMTAYARIEHKAQWGTASW--EIRSVNQRYLETYLRLPEQFRSFEPVLRDRLRNRLSR 59
           I SMT +A    +   G  SW  E+RSVN + L+  LR+P+     E  LR +L   LSR
Sbjct: 3   IYSMTGFAA--GQGSTGAHSWSCELRSVNAKGLDLRLRIPDWLDGLETSLRGQLSKALSR 60

Query: 60  GKVEVNLRYELADNSNNELKLNQGLAKQLLDAASWLKQEAGQGEVNLT-----DILRWPG 114
           G V + LR   ++ +   L++NQ     LL A + ++++A    V L      D+L   G
Sbjct: 61  GNVSMTLRISRSEEAAAALQINQPALATLLTAVAEVERQAAAAGVTLAQTSAADLLAQRG 120

Query: 115 VL--SSAEQDMDAIGADLMTAFDLAIDQFIEARGREGAAIKDMLLSRLDGVSEQIAIVRE 172
           VL  +S   D   I A L T F   +  F+  R  EGAA+K +L+ +LD    QIA +RE
Sbjct: 121 VLEQASGSDDPAPIVAALSTDFATILSDFVNMRATEGAALKTVLMDQLD----QIATLRE 176

Query: 173 HMPKVMEYQRDKLTN-------RLAEIKGELDPARIEQEMILLAQKQDVAEEMDRLEAHV 225
                 + ++ ++ +       R+ E    +D  R+ QE+ LLA K DV EE+DRL AHV
Sbjct: 177 EAAHRADARKAEVASTLRSNLARVLENSDGVDETRLAQELALLAVKADVTEELDRLTAHV 236

Query: 226 NEARRILKKGGSEGRRLDFMMQEFNRESNTLASKSISTEITAAAVDLKVLIEQMREQIQN 285
             AR +L KGG+ GR+LDF+MQEFNRE+NTL +K+ ++++TA  ++LK +I+QMREQ+QN
Sbjct: 237 AAARELLAKGGAVGRKLDFLMQEFNREANTLCAKAQNSDLTAVGLELKAVIDQMREQVQN 296

Query: 286 VE 287
           +E
Sbjct: 297 IE 298