Pairwise Alignments

Query, 287 a.a., conserved hypothetical protein TIGR00255 (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 287 a.a., YicC/YloC family endoribonuclease from Escherichia coli Nissle 1917

 Score =  357 bits (916), Expect = e-103
 Identities = 175/287 (60%), Positives = 234/287 (81%)

Query: 1   MIQSMTAYARIEHKAQWGTASWEIRSVNQRYLETYLRLPEQFRSFEPVLRDRLRNRLSRG 60
           MI+SMTAYAR E K +WG+A+WE+RSVNQRYLETY RLPEQFRS EPV+R+R+R+RL+RG
Sbjct: 1   MIRSMTAYARREIKGEWGSATWEMRSVNQRYLETYFRLPEQFRSLEPVVRERIRSRLTRG 60

Query: 61  KVEVNLRYELADNSNNELKLNQGLAKQLLDAASWLKQEAGQGEVNLTDILRWPGVLSSAE 120
           KVE  LRYE   ++  EL LN+ LAKQL+ AA+W+K ++ +GE+N  DILRWPGV+++ E
Sbjct: 61  KVECTLRYEPDVSAQGELILNEKLAKQLVTAANWVKMQSDEGEINPVDILRWPGVMAAQE 120

Query: 121 QDMDAIGADLMTAFDLAIDQFIEARGREGAAIKDMLLSRLDGVSEQIAIVREHMPKVMEY 180
           QD+DAI A+++ A D  +D FI AR  EG A+K ++  RL+GV+ ++A VR HMP+++++
Sbjct: 121 QDLDAIAAEILAALDGTLDDFIIARETEGQALKVLIEQRLEGVTAEVAKVRAHMPEILQW 180

Query: 181 QRDKLTNRLAEIKGELDPARIEQEMILLAQKQDVAEEMDRLEAHVNEARRILKKGGSEGR 240
           QR++L  +L + + +L+  R+EQE++LLAQ+ DVAEE+DRLEAHV E   ILKK  + GR
Sbjct: 181 QRERLIAKLEDAQVQLENNRLEQELVLLAQRIDVAEELDRLEAHVKETYNILKKKEAVGR 240

Query: 241 RLDFMMQEFNRESNTLASKSISTEITAAAVDLKVLIEQMREQIQNVE 287
           RLDFMMQEFNRESNTLASKSI+ E+T +A++LKVLIEQMREQIQN+E
Sbjct: 241 RLDFMMQEFNRESNTLASKSINAEVTNSAIELKVLIEQMREQIQNIE 287