Pairwise Alignments

Query, 287 a.a., conserved hypothetical protein TIGR00255 (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 292 a.a., hypothetical protein (RefSeq) from Bacteroides thetaiotaomicron VPI-5482

 Score =  121 bits (303), Expect = 2e-32
 Identities = 83/291 (28%), Positives = 150/291 (51%), Gaps = 5/291 (1%)

Query: 1   MIQSMTAYARIEHKAQWGTASWEIRSVNQRYLETYLRLPEQFRSFEPVLRDRLRNRLSRG 60
           MIQSMT Y +   +      + EI+S+N + ++   R+   +R  E  +R+ +   L RG
Sbjct: 1   MIQSMTGYGKATAELPDKKINVEIKSLNSKAMDLSTRIAPAYREKEIEIRNEISKVLERG 60

Query: 61  KVEVNLRYELADNSNNELKLNQGLAKQLLDAASWLKQEAGQGEVN--LTDILRWPGVLSS 118
           KV+ +L  E  +++ +   +NQ L +        + +  G          +LR P V+S 
Sbjct: 61  KVDFSLWIEKKESAESATPINQVLVEGYYKQIQAISENLGIPVPTDWFQTLLRMPDVMSK 120

Query: 119 AE-QDMDAIGADLMTAFDL-AIDQFIEARGREGAAIKDMLLSRLDGVSEQIAIVREHMPK 176
            E Q++     +++ A  L AI   ++ R +EGAA++     ++  ++  +  +  +  +
Sbjct: 121 TEIQELTEEEWEMVRATVLEAIGHLVDFRKQEGAALEKKFREKIANIALLLEKITPYEKE 180

Query: 177 VMEYQRDKLTNRLAE-IKGELDPARIEQEMILLAQKQDVAEEMDRLEAHVNEARRILKKG 235
            +E  ++++T+ L + +  + D  R+EQE+I   +K DV EE  RL  H+      L+ G
Sbjct: 181 RVEKVKERITDALEKTLNTDYDKNRLEQELIYYIEKLDVNEEKQRLTNHLKYFISTLESG 240

Query: 236 GSEGRRLDFMMQEFNRESNTLASKSISTEITAAAVDLKVLIEQMREQIQNV 286
             +G++L F+ QE  RE NTL SKS   E+    V +K  +EQ++EQ+ NV
Sbjct: 241 NGQGKKLGFIAQEMGREINTLGSKSNHAEMQKIVVQMKDELEQIKEQVLNV 291