Pairwise Alignments

Query, 294 a.a., rarD protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 295 a.a., Protein rarD from Pseudomonas fluorescens FW300-N2E2

 Score =  260 bits (665), Expect = 2e-74
 Identities = 134/284 (47%), Positives = 189/284 (66%), Gaps = 8/284 (2%)

Query: 7   RKGILLAVSAYCMWGFAPLYFKLLHHVSATEILLHRVIWSFVFMVIIMMFIGGFGKLRQL 66
           R+G +L +SAY +WG  P+YFK +  V + EI++HRV+WS +F   +++     G  R+L
Sbjct: 7   RRGYILGLSAYIIWGLFPIYFKAIASVPSVEIIIHRVLWSALFGAALLLVWKHPGWWREL 66

Query: 67  FKQPKQLIVLTITSLLIAGNWLLFIWAVNNDHMLDASLGYFINPLLNVLLGMLFLGERLR 126
              P++L +L ++  LIA NWL ++WAVNN+ ML+ASLGY+INPL+NVLLGML LGERLR
Sbjct: 67  RDNPQRLAILALSGTLIAANWLTYVWAVNNERMLEASLGYYINPLVNVLLGMLILGERLR 126

Query: 127 KLQWFAVALASAGVLIQLISFGSIPIVSLALAGTFGLYALLRKKVNVDAKSGLLVETAIL 186
           ++QW AV LA+ GV  Q+   GS+P VSL LA TFG Y L+RK+  V A  GL+VET +L
Sbjct: 127 RMQWLAVGLAAVGVAQQVWQVGSLPWVSLVLALTFGFYGLIRKQAPVKALPGLVVETWML 186

Query: 187 LPVALVYLV--ATLDSATANMLTND--WHLNLLLMAAGIVTTIPLLCFAGAAVRIPLSML 242
           +P+A+ +L+   T  SA A   T    W     L+AAG VT +PL+CF  A   +P + +
Sbjct: 187 VPIAIAWLLFNPTATSAQAAFWTTSEAW----WLVAAGPVTLVPLVCFNAATRHLPYTTI 242

Query: 243 GFFQYIGPSIMFILAVTLFNEPFDAEKSITFGFIWSALLVFTFD 286
           GF QYI P+++ +LAV LF E   +   + F FIW+ L V++ D
Sbjct: 243 GFLQYIAPTLVLLLAVMLFGEHLSSSTLVAFLFIWAGLAVYSVD 286