Pairwise Alignments

Query, 294 a.a., rarD protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 296 a.a., rarD protein from Pseudomonas stutzeri RCH2

 Score =  264 bits (674), Expect = 2e-75
 Identities = 142/286 (49%), Positives = 186/286 (65%)

Query: 1   MPDTEYRKGILLAVSAYCMWGFAPLYFKLLHHVSATEILLHRVIWSFVFMVIIMMFIGGF 60
           M     RKG LL ++ + +WG  PLYFK L    A EI+  RVIWS VF  ++++     
Sbjct: 1   MATANLRKGYLLGLATFSIWGMFPLYFKALEQYGALEIVTQRVIWSAVFGSLVLLVWRHP 60

Query: 61  GKLRQLFKQPKQLIVLTITSLLIAGNWLLFIWAVNNDHMLDASLGYFINPLLNVLLGMLF 120
           G  R+L   P++L VL I+S+LIA NWL+++WAVN+D M++ASLGY+INPL+NVLLGML 
Sbjct: 61  GWWRELLAHPRRLGVLGISSVLIAANWLIYVWAVNHDRMVEASLGYYINPLVNVLLGMLV 120

Query: 121 LGERLRKLQWFAVALASAGVLIQLISFGSIPIVSLALAGTFGLYALLRKKVNVDAKSGLL 180
           L ERLR LQW AVA+A+ GV +QL+  G  P +S+ LA +FG Y LLRK   V A  GL+
Sbjct: 121 LRERLRPLQWLAVAMATVGVSLQLLMLGEFPWISIVLALSFGSYGLLRKLAPVAALPGLV 180

Query: 181 VETAILLPVALVYLVATLDSATANMLTNDWHLNLLLMAAGIVTTIPLLCFAGAAVRIPLS 240
           VET +LLPVALV+L       +           L LMAAG VT IPLL F  AA  +P S
Sbjct: 181 VETWMLLPVALVWLFWFSSGTSTEPAFWTSSDALWLMAAGPVTLIPLLGFNAAARHLPYS 240

Query: 241 MLGFFQYIGPSIMFILAVTLFNEPFDAEKSITFGFIWSALLVFTFD 286
            LGF QY+ P+++ ILAV LF EPF  ++ + F  IW+ L V++ D
Sbjct: 241 TLGFLQYLTPTLLLILAVQLFGEPFPVDRQLAFFCIWAGLAVYSLD 286