Pairwise Alignments

Query, 294 a.a., rarD protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 297 a.a., protein RarD from Phaeobacter inhibens DSM 17395

 Score =  213 bits (542), Expect = 4e-60
 Identities = 106/280 (37%), Positives = 165/280 (58%), Gaps = 1/280 (0%)

Query: 8   KGILLAVSAYCMWGFAPLYFKLLHHVSATEILLHRVIWSFVFMVIIMMFIGGFGKLRQLF 67
           +G+  AVSAY MWGF PLY K L H+ A E++ HRVIWS     ++++ +     LR   
Sbjct: 12  QGLAFAVSAYLMWGFLPLYMKALAHMPAAEVVAHRVIWSVPVAGVLLIILRRTRDLRAAL 71

Query: 68  KQPKQLIVLTITSLLIAGNWLLFIWAVNNDHMLDASLGYFINPLLNVLLGMLFLGERLRK 127
             P+ L++  +T+ LI+ NW +++W++   H LDA+LGY+INPL +V+LG + LGERL  
Sbjct: 72  TSPRVLMMGAVTAALISVNWGIYVWSIATGHALDAALGYYINPLFSVMLGAVLLGERLSP 131

Query: 128 LQWFAVALASAGVLIQLISFGSIPIVSLALAGTFGLYALLRKKVNVDAKSGLLVETAILL 187
            Q  A+ LA+  VL+  +  G +P  ++ L  ++G YA  +K + V    G ++E  +L 
Sbjct: 132 AQLVAIGLAALAVLVLALDAGRLPWAAIGLTLSWGFYAFFKKSLPVGPNQGFMLEVLLLT 191

Query: 188 PVALVYLVATLDSATANMLTNDWHLNLLLMAAGIVTTIPLLCFAGAAVRIPLSMLGFFQY 247
           P AL YL A L          D+    LL+  G+VT +PL+ +A  A  + LS +G  QY
Sbjct: 192 PPALAYL-AYLTVTGGAHFGGDFSDTALLLGCGVVTAVPLITYANGAKLLRLSTIGILQY 250

Query: 248 IGPSIMFILAVTLFNEPFDAEKSITFGFIWSALLVFTFDM 287
           I P+++F+ AV +F E F   + I F  IW AL++++  +
Sbjct: 251 IAPTMIFLAAVFVFGEEFGRARMIAFPMIWLALVIYSVSL 290