Pairwise Alignments

Query, 607 a.a., ATP-dependent DNA helicase RecQ (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 609 a.a., ATP-dependent DNA helicase RecQ from Pantoea sp. MT58

 Score =  721 bits (1860), Expect = 0.0
 Identities = 353/608 (58%), Positives = 450/608 (74%), Gaps = 1/608 (0%)

Query: 1   METQLLNTHDDPLSERLAQVFGYRDFRDGQREVIERVCRGEDCLVIMPTGGGKSLCYQLP 60
           M T  +   +    + L   FGY+ FR GQ+ +I +   G DCLV+MPTGGGKSLCYQ+P
Sbjct: 1   MATSAVLNQEALAQQVLQDTFGYQHFRPGQQTIIHQALSGRDCLVVMPTGGGKSLCYQIP 60

Query: 61  ALMMHGITIVVSPLISLMKDQVDSLLQTGVNAAYLNSSQPRELSLEVLRQLHLGELKLLY 120
           AL+  G+T+VVSPLISLMKDQVD LL  GV AAYLNS+  R+    V+     G +KLLY
Sbjct: 61  ALVREGLTLVVSPLISLMKDQVDQLLANGVAAAYLNSTMTRDQQQTVMADCRTGRVKLLY 120

Query: 121 VSPERLLTADFIERMQSLPLSMFAIDEAHCISQWGHDFRPEYAALGQLKQLFPHVPMMAL 180
           ++PERL+  +F+E +     +M A+DEAHCISQWGHDFRPEY ALG+++Q FP +P+MAL
Sbjct: 121 IAPERLMMDNFLESLAHWQPAMLAVDEAHCISQWGHDFRPEYGALGKMRQRFPELPVMAL 180

Query: 181 TATADQATRQNICERLGI-NPFKLLSSFDRPNIRYTVAEKLNAANQLRQFLLQQNGSSGI 239
           TATAD+ TR +I   L + +P   +SSFDRPNIRYT+ EK    +QL +++  Q G  GI
Sbjct: 181 TATADETTRNDIVNLLHMQDPLIQISSFDRPNIRYTLVEKFKPTDQLLRYVQDQRGKCGI 240

Query: 240 IYCSSRRRVDEVAERLTLQGFHAKAYHAGMTPEERGEVQDSFLKDQIDIVVATVAFGMGI 299
           IYC+SR +V++ A RL  +GF   AYHAG+  E+RG VQ++F +D + IVVATVAFGMGI
Sbjct: 241 IYCNSRAKVEDTAARLQSRGFSVGAYHAGIDSEQRGRVQEAFQRDDLQIVVATVAFGMGI 300

Query: 300 NKSNVRFVVHYDIPKSIEAYYQETGRAGRDGLEAEAFMLFDPADIGRVRHLIEQSEPGPQ 359
           NK NVRFVVH+DIP++IE+YYQETGRAGRDGL AEA ML+DPAD+  +R  +E+  PGP 
Sbjct: 301 NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMAWLRKCLEEKVPGPL 360

Query: 360 QQVEFHKLNTMAAFAEAQTCRRQVLLHYFDESALEPCGNCDICLDPPKRYNGSEDAQKVL 419
           Q +E HKLN M AFAEAQTCRR VLL+YF E   +PCGNCDICLDPPKRY+G  +AQK L
Sbjct: 361 QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQQPCGNCDICLDPPKRYDGLVEAQKAL 420

Query: 420 SCIYRLGQRFGINHLIEVLRGSKGAAIVDRGHDKLSTWGIGKDKSHEYWLSVIRQLIHLG 479
           S IYR+GQRFG+ +++EVLRGS    I ++GHDKL  +G+GKD+SHE+W+SV+RQLIHLG
Sbjct: 421 SGIYRVGQRFGMGYIVEVLRGSNNQRIREQGHDKLPVYGLGKDQSHEHWVSVLRQLIHLG 480

Query: 480 LASQDITRGSSITLNPSARPILKGEVALMLAEPRIQLTSIKRKTTQSRVPLNYDRKLFAR 539
           L +Q+I   S++ L  +ARP+L+GEV LMLA PR+     K  +    +  NYDRKLFA+
Sbjct: 481 LVTQNIAMHSALQLTEAARPVLRGEVPLMLAVPRLITAKTKSSSPAKFLGGNYDRKLFAK 540

Query: 540 LKTLRREIAEEQDVPPYLVFNDATLAEMAAMMPTSPGEMLAVNGVGERKLSRFGGEFLDE 599
           L+ LR+ IA+E+++PPY+VFNDATL EMA  MP S  EML+VNGVG RKL RFG  FL  
Sbjct: 541 LRKLRKAIADEENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGHRKLERFGKPFLVM 600

Query: 600 IAAYLAGE 607
           I  +L  E
Sbjct: 601 IKEHLDDE 608