Pairwise Alignments

Query, 404 a.a., ISSod3, transposase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 178 a.a., Mobile element protein from Xanthomonas campestris pv. campestris strain 8004

 Score = 89.0 bits (219), Expect = 1e-22
 Identities = 54/148 (36%), Positives = 78/148 (52%), Gaps = 3/148 (2%)

Query: 228 CEMVLFRAPSKGRK--GQRSTTTDCHHTAQWTYELTAKEPWALVTNLTIEAMSPQKLVNI 285
           C +V++    +GRK   +RS       ++        +EPW +V +  ++A S ++LVN+
Sbjct: 4   CRLVIYAKARQGRKQCNRRSPAKVSRASSSLKAAAREREPWLIVASPQLQAPSAKQLVNV 63

Query: 286 YQKRMQIEETFRDLKSPAYGFGLRHSRTRYAARMDILLLIALLVQLAFWWVGLYGETQQL 345
           Y +RMQIE  FRDLKS  YG  L  S TR   R+ ILLLI  L   A W  GL  E   +
Sbjct: 64  YARRMQIELAFRDLKSHRYGQALEDSLTRRGERLQILLLINTLAAFASWLAGLGCEATGI 123

Query: 346 QRHFQANTVKKRNVLSTIRMGKELLRRR 373
            +         R + ST+R+G+E L R+
Sbjct: 124 AQWLSPRN-STRKLYSTLRIGREALVRQ 150