Pairwise Alignments

Query, 194 a.a., TPR domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 580 a.a., tetratricopeptide TPR_2 (RefSeq) from Shewanella amazonensis SB2B

 Score =  219 bits (557), Expect = 1e-61
 Identities = 107/188 (56%), Positives = 142/188 (75%)

Query: 1   MDFRALALSLLLWLVPLWACANDQLDKLTQQVYQYPTKALAQITELEKQQQTDNTSNIDK 60
           M F      LLLWL+PL   A + +D+++  V+QYP +A +QI  LE + +   T++++ 
Sbjct: 1   MGFHHRICGLLLWLLPLLVLAREPMDEISTLVFQYPAEAKSQIALLEDEFRHSPTTDLNN 60

Query: 61  LRLSILKCQNLLQLGENEAAINLAQMGEAHAKQLKLDQARPYFFNCQADAYLNYDNIQDA 120
           LRL +LKC+ LL+ G+NEAAINLAQMGEA AK+L ++ ARPYF  C A+AY  Y+N+Q A
Sbjct: 61  LRLKLLKCELLLEQGDNEAAINLAQMGEATAKRLGVEYARPYFIACLANAYSRYNNVQVA 120

Query: 121 LPLLDSAITLARRYQQPQALIDALRLRGQLDTNTDNFSSAIEDLRIAIDIYPDIHTQTQN 180
           LP LD+A+TLA+RYQQPQALI ALRLRGQLDT  +N++SAIEDLR+A+D Y  I  Q QN
Sbjct: 121 LPQLDTAVTLAKRYQQPQALILALRLRGQLDTEAENYTSAIEDLRVALDAYEGIQNQQQN 180

Query: 181 WIWPPEAV 188
           WIWPP+A+
Sbjct: 181 WIWPPKAL 188