Pairwise Alignments

Query, 522 a.a., 2-isopropylmalate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 520 a.a., 2-isopropylmalate synthase (EC 2.3.3.13) from Xanthomonas campestris pv. campestris strain 8004

 Score =  406 bits (1044), Expect = e-118
 Identities = 216/496 (43%), Positives = 301/496 (60%), Gaps = 4/496 (0%)

Query: 7   IFDTTLRDGEQALAASLSVKEKLQIAMALERLGVDVMEVGFPVSSPGDFESVQTIARTIK 66
           IFDTTLRDGEQ+   S++ ++KL +A AL+ LGVD++E GFP SS  D E+V  + R ++
Sbjct: 14  IFDTTLRDGEQSPGCSMTPQQKLVMARALDALGVDIIETGFPASSYSDREAVAMMGRELR 73

Query: 67  NSRVCALSRALEKDIDAAAQALSVAEQFRIHTFISTSTIHVESKLKRSFEQVLEMAVGAV 126
              +  LSR L+ DI+ +A+AL  A   R+H F+STS +H E KL+ S EQVLE     V
Sbjct: 74  RPTLAVLSRCLQADIEISARALEAAANPRLHVFLSTSPLHREHKLRMSREQVLESVHKHV 133

Query: 127 KYARRFTDDVEFSCEDAGRTPIDNLCRMVEAAIHAGARTINIPDTVGYTVPSEFGSIIQT 186
             AR + DD+EFS EDA RT  D L  +   AI AGA TIN+PDTVG+T P E   +   
Sbjct: 134 TLARGYIDDIEFSAEDATRTEEDFLAEVTRVAIAAGATTINLPDTVGFTTPEEIRGMFSR 193

Query: 187 LFNRVPNIDQAIISVHCHDDLGLSVANSITAVQHGARQIECTMNGIGERAGNCSLEEIAM 246
           L   V   ++ I S HCH+DLGL+ ANS+ A++ GARQ+ECT+NGIGERAGNC+LEEI M
Sbjct: 194 LIASVEGAEKVIFSTHCHNDLGLAAANSLAAIEGGARQVECTINGIGERAGNCALEEITM 253

Query: 247 ILATRKNLLGFETGINAKEIHRTSNLVSQLCNMPIQSNKAIVGANAFTHSSGIHQDGMLK 306
            L  R      +T IN   I  TS L+ +L  MP+Q NKA+VG NAF H SGIHQ GML+
Sbjct: 254 ALKVRGAFYNLDTAINTPRIVSTSQLLQRLVGMPVQRNKAVVGGNAFAHESGIHQHGMLR 313

Query: 307 AQNTYEIMTPESIGLNRNNLNMTSRSGRHVIKHRMEEMGYSSQDYNLDALYEQFLHLADK 366
            + TYEIM PE +G   + + +   SGR  ++ R+  +GY  ++     ++EQF  L +K
Sbjct: 314 HRGTYEIMRPEDVGWESSQMVLGRHSGRAAVEQRLRALGYLLEEDEAKLVFEQFKALCEK 373

Query: 367 KGQVFDYDLEALAFIEAQAAEDNFYQLRQLVVQSDSTEGVATATVRIEVGGEIKTEAATG 426
           +  V D DL+AL      A     Y+L  + +    +   A   +    G  +  E A G
Sbjct: 374 QRVVTDADLQALM---QDATVQEGYRLASMTISDVGSRANALVELSDPDGNRV-AETAQG 429

Query: 427 NGPVDAAYNAIARATDRRIDIISYKLGAKGVGQDALGQVDITAVYHEQNFHGVGLATDVV 486
           NGPVDA + A+A AT  ++++ SY++ + G+G DA G+  ++  +    + G G + D++
Sbjct: 430 NGPVDALFGALASATGVKLELDSYQVHSVGIGADARGEASLSVRHDGVEYEGTGTSKDII 489

Query: 487 EASARALVHVMNLTCR 502
           EASA A + V N   R
Sbjct: 490 EASALAWLDVANRLLR 505