Pairwise Alignments

Query, 522 a.a., 2-isopropylmalate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 524 a.a., 2-isopropylmalate synthase from Rhodopseudomonas palustris CGA009

 Score =  441 bits (1135), Expect = e-128
 Identities = 232/496 (46%), Positives = 317/496 (63%), Gaps = 2/496 (0%)

Query: 3   NRVIIFDTTLRDGEQALAASLSVKEKLQIAMALERLGVDVMEVGFPVSSPGDFESVQTIA 62
           +RVIIFDTTLRDGEQ   A+++ +EKL +A  L+ +GVDV+E G+P +S GDFE+V  IA
Sbjct: 10  DRVIIFDTTLRDGEQCPGATMTFEEKLNVARMLDDMGVDVIEAGYPFASDGDFEAVHEIA 69

Query: 63  RTIKNSRVCALSRALEKDIDAAAQALSVAEQFRIHTFISTSTIHVESKLKRSFEQVLEMA 122
           +  KNS +C LSRA  KDID  A+A+  AE+ RIHTF+STS +H++ KL+    QV EM 
Sbjct: 70  KRSKNSVICGLSRAAHKDIDRCAEAIKPAERGRIHTFLSTSPVHMKYKLQMEAAQVYEMV 129

Query: 123 VGAVKYARRFTDDVEFSCEDAGRTPIDNLCRMVEAAIHAGARTINIPDTVGYTVPSEFGS 182
           + +V  AR  TDDVE+S EDA RT  D LCR +EAAI AGA TIN+PDTVGY VP E+  
Sbjct: 130 ISSVTRARNHTDDVEWSAEDATRTEFDFLCRCIEAAIKAGATTINLPDTVGYAVPEEYRE 189

Query: 183 IIQTLFNRVPNIDQAIISVHCHDDLGLSVANSITAVQHGARQIECTMNGIGERAGNCSLE 242
           + + +   VPN D+A  SVHCH+DLG++VANS+  V  GARQIECT+NGIGERAGN +LE
Sbjct: 190 LFRKVRETVPNSDKARFSVHCHNDLGMAVANSMAGVAGGARQIECTINGIGERAGNAALE 249

Query: 243 EIAMILATRKNLLGFETGINAKEIHRTSNLVSQLCNMPIQSNKAIVGANAFTHSSGIHQD 302
           E+ M +  R++ L +   I    +   S  VS   + P+Q NKAIVG NAF H SGIHQD
Sbjct: 250 EVVMAMRVRQDRLPYWNRIETTMLTHASKTVSAATSFPVQYNKAIVGRNAFAHESGIHQD 309

Query: 303 GMLKAQNTYEIMTPESIGLNRNNLNMTSRSGRHVIKHRMEEMGYSSQDYNLDALYEQFLH 362
           GM+K   TYEIMTPE++G+   +L M   SGR  + H+MEE+GY      ++ ++ +F  
Sbjct: 310 GMIKNAQTYEIMTPETVGVKGTSLVMGKHSGRAGLIHKMEELGYKLSRNQIEDVFVRFKA 369

Query: 363 LADKKGQVFDYDLEALAFIEAQAAEDNFYQLRQLVVQSDSTEGVATATVRIEVGGEIKTE 422
           LAD+K  V+D D+EAL   +    +D    +   V+    T G   AT++++V G+I+ E
Sbjct: 370 LADRKKDVYDEDIEALVDEQLLHGQDQIKLMSLTVIA--GTHGPQRATMKLDVDGQIRIE 427

Query: 423 AATGNGPVDAAYNAIARATDRRIDIISYKLGAKGVGQDALGQVDITAVYHEQNFHGVGLA 482
            A GNGPVDA +N I         +  Y++ A   G DA  +V +   +  ++       
Sbjct: 428 EAEGNGPVDAVFNCIKALVPHDAKLELYQVHAVTEGTDAQAEVSVRLSHEGRSMTARAAD 487

Query: 483 TDVVEASARALVHVMN 498
            D + ASA+A +  +N
Sbjct: 488 PDTLVASAKAYLGALN 503