Pairwise Alignments

Query, 522 a.a., 2-isopropylmalate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 386 a.a., 2-isopropylmalate synthase (EC 2.3.3.13) (from data) from Pedobacter sp. GW460-11-11-14-LB5

 Score =  405 bits (1041), Expect = e-117
 Identities = 204/376 (54%), Positives = 268/376 (71%), Gaps = 1/376 (0%)

Query: 3   NRVIIFDTTLRDGEQALAASLSVKEKLQIAMALERLGVDVMEVGFPVSSPGDFESVQTIA 62
           N+V IFDTTLRDGEQ     L   +K++IA +LE LGVDV+E GFPVSSPGDF SV  ++
Sbjct: 6   NKVYIFDTTLRDGEQVPGCQLDTNQKVEIAKSLELLGVDVIEAGFPVSSPGDFNSVIELS 65

Query: 63  RTIKNSRVCALSRALEKDIDAAAQALSVAEQFRIHTFISTSTIHVESKLKRSFEQVLEMA 122
           + + N  +CAL+RA + DID AA AL  A++ RIHT I +S  H++ K   + E++LE A
Sbjct: 66  KAVTNPIICALTRANKNDIDVAADALRYAKRPRIHTGIGSSDFHIKHKFNSTREEILERA 125

Query: 123 VGAVKYARRFTDDVEFSCEDAGRTPIDNLCRMVEAAIHAGARTINIPDTVGYTVPSEFGS 182
           V AV+Y+++F +DVEF  EDAGR  I+ L +MVEA I AGA  +NIPDT GY +P ++GS
Sbjct: 126 VEAVRYSKKFVEDVEFYAEDAGRADIEFLAKMVEAVIAAGATVVNIPDTNGYCLPDQYGS 185

Query: 183 IIQTLFNRVPNIDQAIISVHCHDDLGLSVANSITAVQHGARQIECTMNGIGERAGNCSLE 242
            I  L   V NID+AIISVHCH+DLGL+ ANSI  +Q+GARQ+ECT+NGIGERAGN S+E
Sbjct: 186 KILFLKENVKNIDKAIISVHCHNDLGLATANSIAGLQNGARQVECTINGIGERAGNTSME 245

Query: 243 EIAMILATRKNLLGFETGINAKEIHRTSNLVSQLCNMPIQSNKAIVGANAFTHSSGIHQD 302
           E+ MIL T K +LG  T I+A   +  S++V    NMP+Q NKAIVG NAF+HSSGIHQD
Sbjct: 246 EVVMILKTHK-ILGLNTQIDATRFYEMSHMVRNQMNMPVQPNKAIVGGNAFSHSSGIHQD 304

Query: 303 GMLKAQNTYEIMTPESIGLNRNNLNMTSRSGRHVIKHRMEEMGYSSQDYNLDALYEQFLH 362
           G LK +  YEI+ PE +G     + +T+RSGRH +KH ++ +G+  +  +LD +Y+QFL 
Sbjct: 305 GFLKNRENYEIIKPEDVGFPDATIVLTARSGRHALKHHLDRLGHKLEKDHLDIVYKQFLV 364

Query: 363 LADKKGQVFDYDLEAL 378
           LAD K  + D DL  L
Sbjct: 365 LADSKQGINDQDLNQL 380