Pairwise Alignments

Query, 522 a.a., 2-isopropylmalate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 540 a.a., putative alpha-isopropylmalate/homocitrate synthase family transferase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  172 bits (436), Expect = 3e-47
 Identities = 150/526 (28%), Positives = 255/526 (48%), Gaps = 41/526 (7%)

Query: 1   MSNRVIIFDTTLRDGEQALAASLSVKEKLQIAMALERLGVDVMEVGFPVSSPGDFESVQT 60
           M+ R+ ++DTTLRDG Q+   +L+  +KL+IA+ L+ +G+D +E G+P S+P D    + 
Sbjct: 1   MTRRIQLYDTTLRDGSQSEDINLTAADKLKIALKLDEIGIDRIEGGWPGSNPVDVAFFKE 60

Query: 61  IART-IKNSRVCALSRA----LEKDIDAAAQALSVAEQFRIHTFISTSTIHVESKLKRSF 115
           IA   +K++ + A           D D   +A++ +       F  +  +H    L+   
Sbjct: 61  IANYHLKHAVISAFGSTHHPNFTADSDPNLRAIAESGARVASIFGKSCEVHAAEALRLDA 120

Query: 116 EQVLEMAVGAVKYARRFTDDVEFSCE---DAGRTPIDNLCRMVEAAIHAGARTINIPDTV 172
            + LE+   +V + +    +V F  E   D  R         +  A  AGA  + + DT 
Sbjct: 121 ARNLEIIGDSVAFLKGKLAEVYFDAEHFFDGYRHNAAYALSALRRAHEAGADVLVLCDTN 180

Query: 173 GYTVPSEFGSIIQTLFNRVPNIDQAIISVHCHDDLGLSVANSITAVQHGARQIECTMNGI 232
           G T+P E   I+  +   +P    A + +H H+D  L+VANSI AVQ GA QI+ T+NG+
Sbjct: 181 GGTLPHEVARIVTEVREALPG---AAVGIHAHNDCELAVANSIAAVQAGAVQIQGTINGV 237

Query: 233 GERAGNCSLEEIAMILATRKNLLGFETGI----NAKEIHRTSNLVSQLCNMPIQSNKAIV 288
           GER GN +L     I+ T +   G E         +++   +  VS++ N+P  S +  V
Sbjct: 238 GERCGNANL---CSIIPTLELKFGGEYTCLPEGRLQQLTAVAAYVSEVANIPPFSRQPYV 294

Query: 289 GANAFTHSSGIHQDGMLKAQNTYEIMTPESIGLNRNNLNMTSRSGRHVIKHRMEEMGYSS 348
           G +AF H  G+H   + +  + YE ++P+ +G NR  + +T  +GR  I       G+  
Sbjct: 295 GRSAFAHKGGVHVSAVNRKSSLYEHISPDVVG-NRQRILITELAGRSNIVSLARRFGF-H 352

Query: 349 QDYNLDALYEQFLHLADKKGQVFDY-------DLEALAFIEAQAAEDNF--YQLRQLVVQ 399
            D +   +      L  K    +DY       +L  L  +  +   + F   Q R L  +
Sbjct: 353 LDKDEPVVKGLLTELKKKASLGYDYAAAEASVELLILRKLARRGVREFFRLLQFRVLETK 412

Query: 400 SDST-EGVATATVRIEVGGEIKTEAATGNGPVDAAYNAIARA------TDRRIDIISYKL 452
            DS  E V+  +V ++V G  +  AATG GPV+A  NA+ +A          + ++ +K+
Sbjct: 413 HDSEGEPVSEVSVMVDVEGVTEHTAATGRGPVNALDNALRKALLGFYPRLSEMRLLDFKV 472

Query: 453 ----GAK-GVGQDALGQVDITAVYHEQNFHGVGLATDVVEASARAL 493
               GA+ G G  +  +V I +   +  +  VG++ +++EAS +AL
Sbjct: 473 RVLTGAETGGGTASTVRVLIESGDSDSRWVTVGVSFNIIEASWQAL 518